myRT

myRT report for GCA_002352135.1_ASM235213v1

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Seq: DEHW01000084.1 TPA_asm: Xanthomonadales bacterium UBA2790 UBA2790_contig_11234, whole genome shotgun sequence (12455 bp)
Overview 1 RT 1: 1888-8819 bp Neighborhood of RT #1 [1888, 9451] SppA_67K trmB RVT_N RVT-GII GIIM HNHc PRK09692 Feature: gene Location: 1888-3744 bp Feature: domain Description: SppA_67K Location: 1972-3721 bp Feature: domain Description: SppA_67K Location: 1 972-3721 bp Feature: gene Location: 3750-4502 bp Feature: domain Description: trmB Location: 3852-4458 bp Feature: domain Description: trmB Location: 3852-4458 bp Feature: gene Location: 5564-7234 bp Feature: RT Description: RVT_N Location: 5618-5855 bp Feature: RT Description: RVT_N Location: 561 8-5855 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5906-6545 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5906-6545 bp Feature: domain Description: GIIM Note: maturase Location: 6596-6830 bp Feature: domain Description: GIIM Note: maturase Location: 6596-6830 bp Feature: domain Description: HNHc Note: nucleases Location: 7037-7187 bp Feature: domain Description: HNHc Note: nucleases Location: 7037-71 87 bp Feature: gene Location: 7319-7513 bp Feature: gene Location: 7601-9451 bp Feature: domain Description: PRK09692 Location: 7610-8819 bp Feature: domain Description: PRK09692 Location: 761 0-881 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SppA_67K (TIGR00705), trmB (PRK00121), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), PRK09692 (Integrase; provisional)