myRT

myRT report for GCA_002353035.1_ASM235303v1

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Seq: NWQU01000053.1 Escherichia coli strain OLC1478 OLC1478_Cont0053, whole genome shotgun sequence (22413 bp)
Overview 1 RT 1: 7021-10376 bp Neighborhood of RT #1 [7021, 10381] PRK09413 RVT-GII PinE Feature: gene Location: 7021-7104 bp Feature: gene Location: 7070-7276 bp Feature: domain Description: PRK09413 Location: 7118-7277 bp Feature: domain Description: PRK0941 3 Location: 71 1 8-7277 bp Feature: gene Location: 7788-9113 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8109-8640 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81 09-8640 bp Feature: gene Location: 9323-9724 bp Feature: gene Location: 9824-10381 bp Feature: domain Description: PinE Location: 9827-10376 bp Feature: domain Description: PinE Location: 9827-1 0376 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09413 (IS2 repressor TnpA; Reviewed), RVT-GII, PinE (COG1961)

Seq: NWQU01000099.1 Escherichia coli strain OLC1478 OLC1478_Cont0099, whole genome shotgun sequence (2335 bp)
Overview 1 RT 1: 1-1935 bp Neighborhood of RT #1 [1, 2180] RVT-GII GIIM Feature: gene Location: 1-363 bp Feature: gene Location: 657-2180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)