myRT

myRT report for GCA_002354755.1_ASM235475v1

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Seq: DEME01000013.1 TPA_asm: Marinobacter sp. UBA2678 UBA2678_contig_1392, whole genome shotgun sequence (34155 bp)
Overview 1 RT 1: 26036-28549 bp Neighborhood of RT #1 [26036, 28549] LysR RVT-GII GIIM Feature: gene Location: 26036-27040 bp Feature: domain Description: LysR Location: 26057-26936 bp Feature: domain Description: LysR Location: 26057-26936 bp Feature: gene Location: 27120-27272 bp Feature: gene Location: 27486-27761 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27537-27660 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27537-27660 bp Feature: gene Location: 27923-28381 bp Feature: domain Description: GIIM Note: maturase Location: 28010-28223 bp Feature: domain Description: GIIM Note: maturase Location: 2801 0-28223 bp Feature: gene Location: 28403-28549 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LysR (COG0583), RVT-GII, GIIM (pfam08388)

Seq: DEME01000157.1 TPA_asm: Marinobacter sp. UBA2678 UBA2678_contig_1858, whole genome shotgun sequence (15245 bp)
Overview 1 RT 1: 7866-10789 bp Neighborhood of RT #1 [7866, 10789] DDE_Tnp_1_2 RVT-GII RVT-GII Feature: gene Location: 7866-8150 bp Feature: domain Description: DDE_Tnp_1_2 Location: 7890-8142 bp Feature: domain Description: DDE_Tnp_1_2 Location: 7890-8142 bp Feature: gene Location: 8214-8435 bp Feature: gene Location: 8615-9367 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8636-8984 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8636-8984 bp Feature: gene Location: 9513-9725 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9552-9717 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9552 -9717 bp Feature: gene Location: 9995-10159 bp Feature: gene Location: 10223-10789 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1_2 (pfam13586), RVT-GII

Seq: DEME01000026.1 TPA_asm: Marinobacter sp. UBA2678 UBA2678_contig_3361, whole genome shotgun sequence (11414 bp)
Overview 1 RT 1: 4877-11406 bp Neighborhood of RT #1 [4877, 11411] YeeA RVT-UG5 YeeA Feature: gene Location: 4877-5137 bp Feature: gene Location: 5914-7794 bp Feature: domain Description: YeeA Location: 6343-7588 bp Feature: domain Description: YeeA Location: 63 43 -7588 bp Feature: gene Location: 7927-10965 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 8425-8905 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 8425-8905 bp Feature: gene Location: 10962-11411 bp Feature: domain Description: YeeA Location: 10971-11406 bp Feature: domain Description: YeeA Location: 10971-11406 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YeeA (COG1002), RVT-UG5