myRT

myRT report for GCA_002355095.1_ASM235509v1

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Seq: NWSG01000019.1 Burkholderia sp. IDO3 Scaffold19, whole genome shotgun sequence (171307 bp)
Overview 1 RT 1: 99111-102082 bp Neighborhood of RT #1 [99111, 102082] RVT-GII GIIM Feature: gene Location: 99111-99335 bp Feature: gene Location: 99396-99710 bp Feature: gene Location: 99754-101124 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 100090-100705 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 00090-1 00705 bp Feature: domain Description: GIIM Note: maturase Location: 100768-100966 bp Feature: domain Description: GIIM Note: maturase Location: 1 00768-1 00966 bp Feature: gene Location: 101219-101473 bp Feature: gene Location: 101744-102082 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NWSG01000009.1 Burkholderia sp. IDO3 Scaffold9, whole genome shotgun sequence (253143 bp)
Overview 1 RT 1: 89222-98336 bp Neighborhood of RT #1 [89222, 98365] yhbS PRK05297 RVT_N RVT-GII GIIM HNHc PRK00711 Feature: gene Location: 89222-89764 bp Feature: domain Description: yhbS Location: 89258-89756 bp Feature: domain Description: yhbS Location: 892 58-89756 bp Feature: gene Location: 89764-93828 bp Feature: domain Description: PRK05297 Location: 89779-93826 bp Feature: domain Description: PRK052 97 Location: 89779-9382 6 bp Feature: gene Location: 93980-95680 bp Feature: RT Description: RVT_N Location: 94037-94280 bp Feature: RT Description: RVT_N Location: 94037-942 80 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 94325-94973 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9432 5-94973 bp Feature: domain Description: GIIM Note: maturase Location: 95027-95258 bp Feature: domain Description: GIIM Note: maturase Location: 9502 7-952 58 bp Feature: domain Description: HNHc Note: nucleases Location: 95486-95642 bp Feature: domain Description: HNHc Note: nucleases Location: 95486-95642 bp Feature: gene Location: 95878-96069 bp Feature: gene Location: 97064-98365 bp Feature: domain Description: PRK00711 Location: 97067-98336 bp Feature: domain Description: PRK00711 Location: 97067-98336 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT yhbS (COG3153), PRK05297 (phosphoribosylformylglycinamidine synthase; Provisional), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), PRK00711 (D-amino acid dehydrogenase)

Seq: NWSG01000043.1 Burkholderia sp. IDO3 Scaffold43, whole genome shotgun sequence (56685 bp)
Overview 1 RT 1: 13685-19132 bp Neighborhood of RT #1 [13685, 19155] dTDP_HR_like_SDR_e FIN RVT-Retrons Histone_HNS MFS_MucK Feature: gene Location: 13685-14629 bp Feature: domain Description: dTDP_HR_like_SDR_e Location: 13703-14588 bp Feature: domain Description: dTDP_HR_like_SDR_e Location: 13 703 -14588 bp Feature: gene Location: 14795-15367 bp Feature: domain Description: FIN Location: 14978-15332 bp Feature: domain Description: FIN Location: 14978-153 3 2 bp Feature: gene Location: 15601-16950 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 16066-16702 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 16066-16702 bp Feature: gene Location: 17317-17646 bp Feature: domain Description: Histone_HNS Location: 17338-17575 bp Feature: domain Description: Histone_HNS Location: 173 3 8-17575 bp Feature: gene Location: 17908-19155 bp Feature: domain Description: MFS_MucK Location: 17998-19132 bp Feature: domain Description: MFS_MucK Location: 17998-1913 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dTDP_HR_like_SDR_e (cd05254), FIN (cd16389), RVT-Retrons, Histone_HNS (pfam00816), MFS_MucK (cd17371)

Seq: NWSG01000031.1 Burkholderia sp. IDO3 Scaffold31, whole genome shotgun sequence (98139 bp)
Overview 1 RT 1: 82578-85330 bp Neighborhood of RT #1 [82578, 85330] Avd_like RVT-DGRs Feature: gene Location: 82578-83069 bp Feature: gene Location: 83085-83462 bp Feature: domain Description: Avd_like Location: 83115-83418 bp Feature: domain Description: Avd_like Location: 83115-834 18 bp Feature: gene Location: 83794-84804 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 83887-84574 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 83887-84 574 bp Feature: gene Location: 84831-85136 bp Feature: gene Location: 85136-85330 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs

Seq: NWSG01000028.1 Burkholderia sp. IDO3 Scaffold28, whole genome shotgun sequence (121486 bp)
Overview 1 RT 1: 42595-48119 bp Neighborhood of RT #1 [42595, 48151] PssA PRK05305 RVT_N RVT-GII GIIM HNHc PRK05479 Feature: gene Location: 42595-43467 bp Feature: domain Description: PssA Location: 42733-43411 bp Feature: domain Description: PssA Location: 42733-43411 bp Feature: gene Location: 43482-44126 bp Feature: domain Description: PRK05305 Location: 43506-44118 bp Feature: domain Description: PRK05 305 Location: 435 06-44118 bp Feature: gene Location: 44243-45955 bp Feature: RT Description: RVT_N Location: 44300-44543 bp Feature: RT Description: RVT_N Location: 44300-445 43 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44588-45236 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 445 88-45 236 bp Feature: domain Description: GIIM Note: maturase Location: 45287-45521 bp Feature: domain Description: GIIM Note: maturase Location: 45 287-45 5 21 bp Feature: domain Description: HNHc Note: nucleases Location: 45752-45905 bp Feature: domain Description: HNHc Note: nucleases Location: 45 75 2-45 905 bp Feature: gene Location: 46372-46662 bp Feature: gene Location: 47135-48151 bp Feature: domain Description: PRK05479 Location: 47138-48119 bp Feature: domain Description: PRK05 479 Location: 47138-48119 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PssA (COG1183), PRK05305 (phosphatidylserine decarboxylase family protein), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), PRK05479 (ketol-acid reductoisomerase; Provisional)