myRT

myRT report for GCA_002358135.1_ASM235813v1

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Seq: NWTO01000028.1 Vibrio mediterranei strain 21LN0615E Contig_102, whole genome shotgun sequence (41857 bp)
Overview 1 RT 1: 8705-13944 bp Neighborhood of RT #1 [8705, 13955] HicA_toxin HicB_lk_antitox RVT-GII HTH_XRE COG2932 Feature: gene Location: 8705-8887 bp Ori: PCD85611.1 Feature: domain Description: HicA_toxin Location: 8717-8885 bp Feature: domain Description: HicA_toxin Location: 871 7-8885 bp Feature: gene Location: 8909-9331 bp Ori: PCD85612.1 Feature: domain Description: HicB_lk_antitox Location: 8933-9317 bp Feature: domain Description: HicB_lk_antitox Location: 8933-931 7 bp Feature: gene Location: 9479-10812 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9767-10454 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9767-1 0454 bp Feature: gene Location: 12059-12817 bp Feature: gene Location: 13311-13955 bp Ori: PCD85614.1 Feature: domain Description: HTH_XRE Location: 13326-13497 bp Feature: domain Description: HTH_XRE Location: 1 3326-1 3497 bp Feature: domain Description: COG2932 Location: 13545-13944 bp Feature: domain Description: COG2932 Location: 1 3545-1 3944 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: NWTO01000014.1 Vibrio mediterranei strain 21LN0615E Contig_75, whole genome shotgun sequence (157094 bp)
Overview 1 RT 1: 108301-115197 bp Neighborhood of RT #1 [108301, 115442] PRK14876 vWFA PRK14876 RVT_N RVT-GII GIIM COG3547 RelB Feature: gene Location: 108301-111114 bp Ori: PCD86840.1 Feature: domain Description: PRK14876 Location: 108307-108985 bp Feature: domain Description: PRK14876 Location: 108307-108985 bp Feature: domain Description: vWFA Location: 108997-109393 bp Feature: domain Description: vWFA Location: 108997-109393 bp Feature: domain Description: PRK14876 Location: 109447-111106 bp Feature: domain Description: PRK14876 Location: 109447-111106 bp Feature: gene Location: 111267-111464 bp Feature: gene Location: 111380-112852 bp Ori: PCD86841.1 Gene: ltrA Feature: domain Description: RVT_N Location: 111428-111671 bp Feature: domain Description: RVT_N Location: 11142 8-111671 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 111716-112343 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 111716-112 343 bp Feature: domain Description: GIIM Note: maturase Location: 112403-112628 bp Feature: domain Description: GIIM Note: maturase Location: 112 403-112 62 8 bp Feature: gene Location: 113444-114460 bp Ori: PCD86842.1 Feature: domain Description: COG3547 Location: 113462-114425 bp Feature: domain Description: COG3547 Location: 113462 -11442 5 bp Feature: gene Location: 114936-115442 bp Ori: PCD86885.1 Feature: domain Description: RelB Location: 114942-115197 bp Feature: domain Description: RelB Location: 114942 -115197 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: NWTO01000023.1 Vibrio mediterranei strain 21LN0615E Contig_61, whole genome shotgun sequence (77736 bp)
Overview 1 RT 1: 38922-43975 bp Neighborhood of RT #1 [38922, 43975] malF malG RVT_N RVT-GII GIIM Feature: gene Location: 38922-40493 bp Ori: PCD85905.1 Feature: domain Description: malF Location: 38958-40491 bp Feature: domain Description: malF Location: 3 8958-40491 bp Feature: gene Location: 40505-41287 bp Feature: domain Description: malG Location: 40508-41288 bp Feature: domain Description: malG Location: 40508-41288 bp Feature: gene Location: 41864-43336 bp Ori: PCD85931.1 Gene: ltrA Feature: domain Description: RVT_N Location: 41912-42155 bp Feature: domain Description: RVT_N Location: 41912-42155 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42200-42827 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42200-42827 bp Feature: domain Description: GIIM Note: maturase Location: 42887-43112 bp Feature: domain Description: GIIM Note: maturase Location: 42887-43 112 bp Feature: gene Location: 43252-43449 bp Feature: gene Location: 43505-43975 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: NWTO01000001.1 Vibrio mediterranei strain 21LN0615E Contig_84, whole genome shotgun sequence (1033216 bp)
Overview 1 RT 1: 435942-447817 bp Neighborhood of RT #1 [435942, 447831] MiaE Resolvase Recombinase Zn_ribbon_recom RVT-UG8 RVT-UG3 Mob_Pre MiaE RVT-UNC MiaE Feature: gene Location: 435942-436091 bp Feature: domain Description: MiaE Location: 435972-436092 bp Feature: domain Description: MiaE Location: 4 35972-4 36092 bp Feature: gene Location: 436151-437680 bp Ori: PCD90065.1 Feature: domain Description: Resolvase Location: 436172-436646 bp Feature: domain Description: Resolvase Location: 4 36172-4 3664 6 bp Feature: domain Description: Recombinase Location: 436712-436898 bp Feature: domain Description: Recombinase Location: 4 36712-4 36898 bp Feature: domain Description: Zn_ribbon_recom Location: 436991-437138 bp Feature: domain Description: Zn_ribbon_recom Location: 4 36991-4 37138 bp Feature: gene Location: 437941-439965 bp Ori: PCD90066.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 438517-438961 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 4 38517-4 38961 bp Feature: gene Location: 439966-441192 bp Ori: PCD90067.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 440248-440725 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 4 4 024 8-4 4 0725 bp Feature: gene Location: 441348-442283 bp Ori: PCD90068.1 Feature: domain Description: Mob_Pre Location: 441387-441930 bp Feature: domain Description: Mob_Pre Location: 4 4 1387-4 4 1930 bp Feature: gene Location: 442672-442935 bp Feature: gene Location: 442956-443507 bp Feature: gene Location: 443563-444327 bp Ori: PCD90071.1 Feature: domain Description: MiaE Location: 443578-444304 bp Feature: domain Description: MiaE Location: 4 4 3578-4 4 4 304 bp Feature: gene Location: 444367-446097 bp Ori: PCD90072.1 Feature: RT Description: RVT-UNC Note: UNC RT Location: 444787-445195 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 4 4 4 787-4 4 5195 bp Feature: gene Location: 446097-447041 bp Feature: gene Location: 447199-447831 bp Feature: domain Description: MiaE Location: 447202-447817 bp Feature: domain Description: MiaE Location: 4 4 7202-4 4 7817 bp Sorry, your browser does not support inline SVG.
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