myRT

myRT report for GCA_002358795.1_ASM235879v1

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Seq: DEPN01000020.1 TPA_asm: Alteromonas australica isolate UBA3391 UBA3391_contig_473, whole genome shotgun sequence (106371 bp)
Overview 1 RT 1: 101905-105837 bp Neighborhood of RT #1 [101905, 106370] SlyB M48C_Oma1_like RVT-UG3 RVT-UG8 Feature: gene Location: 101905-102393 bp Feature: domain Description: SlyB Location: 101968-102289 bp Feature: domain Description: SlyB Location: 1 01 968-1 02289 bp Feature: gene Location: 102601-103398 bp Feature: domain Description: M48C_Oma1_like Location: 102808-103354 bp Feature: domain Description: M48C_Oma1 _like Location: 1 02808-1 03354 bp Feature: gene Location: 103688-104899 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 103979-104444 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 1 03979-1 04444 bp Feature: gene Location: 104889-106370 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 105393-105837 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1 05393-1 05837 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SlyB (COG3133), M48C_Oma1_like (cd07342), RVT-UG3, RVT-UG8

Seq: DEPN01000036.1 TPA_asm: Alteromonas australica isolate UBA3391 UBA3391_contig_61, whole genome shotgun sequence (101105 bp)
Overview 1 RT 1: 11116-21028 bp Neighborhood of RT #1 [11116, 21204] DUF45 COG0610 RVT-UG5 YjgR YjgR SIR2_2 Feature: gene Location: 11116-11865 bp Feature: domain Description: DUF45 Location: 11224-11839 bp Feature: domain Description: DUF45 Location: 112 2 4-11839 bp Feature: gene Location: 11880-15161 bp Feature: domain Description: COG0610 Location: 11907-15000 bp Feature: domain Description: COG0610 Location: 11907-15000 bp Feature: gene Location: 15205-18147 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 15694-16150 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 15694-16150 bp Feature: gene Location: 18375-20117 bp Feature: domain Description: YjgR Location: 18825-19020 bp Feature: domain Description: YjgR Location: 1882 5-1902 0 bp Feature: domain Description: YjgR Location: 19470-20049 bp Feature: domain Description: YjgR Location: 19470-2 0049 bp Feature: gene Location: 20119-21204 bp Feature: domain Description: SIR2_2 Location: 20533-21028 bp Feature: domain Description: SIR2 _2 Location: 2 0533-2 102 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF45 (pfam01863), COG0610 (Type I site-specific restriction-modification system, R (restriction) subunit and related helicases ), RVT-UG5, YjgR (COG0433), SIR2_2 (pfam13289)