myRT

myRT report for GCA_002360135.1_ASM236013v1

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Seq: NSDB01000147.1 Enterococcus faecium strain 7527 contig_147, whole genome shotgun sequence (13235 bp)
Overview 1 RT 1: 4985-11411 bp Neighborhood of RT #1 [4985, 11707] HTH_Tnp_1 RVT-UNC AAA_15 TOPRIM_OLD Feature: gene Location: 4985-5213 bp Ori: PCE02334.1 Feature: domain Description: HTH_Tnp_1 Location: 4991-5195 bp Feature: domain Description: HTH_Tnp_1 Location: 4991 -51 95 bp Feature: gene Location: 5213-6111 bp Feature: gene Location: 6305-8137 bp Ori: PCE02335.1 Feature: RT Description: RVT-UNC Note: UNC RT Location: 6788-7229 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 6788-7229 bp Feature: gene Location: 8461-9225 bp Feature: gene Location: 9890-11707 bp Ori: PCE02337.1 Feature: domain Description: AAA_15 Location: 9893-11015 bp Feature: domain Description: AAA_1 5 Location: 9893-1 1 01 5 bp Feature: domain Description: TOPRIM_OLD Location: 11162-11411 bp Feature: domain Description: TOPRIM_OLD Location: 1 1 1 62-1 1 41 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_Tnp_1 (pfam01527), RVT-UG8/RVT-UG12(RVT-UNC), AAA_15 (pfam13175), TOPRIM_OLD (cd01026)

Seq: NSDB01000145.1 Enterococcus faecium strain 7527 contig_145, whole genome shotgun sequence (12068 bp)
Overview 1 RT 1: 2803-5450 bp Neighborhood of RT #1 [2803, 5450] COG2231 RVT-GII GIIM Feature: gene Location: 2803-3069 bp Feature: gene Location: 3224-3850 bp Ori: PCE02427.1 Feature: domain Description: COG2231 Location: 3242-3800 bp Feature: domain Description: COG2 2 31 Location: 32 42 -3800 bp Feature: gene Location: 3981-4523 bp Ori: PCE02428.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3987-4074 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3987-4074 bp Feature: domain Description: GIIM Note: maturase Location: 4131-4359 bp Feature: domain Description: GIIM Note: maturase Location: 4131-4359 bp Feature: gene Location: 4730-5110 bp Feature: gene Location: 5184-5450 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG2231 (Uncharacterized protein related to Endonuclease III ), RVT-GII, GIIM (pfam08388)