myRT

myRT report for GCA_002362105.1_ASM236210v1

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Seq: DETD01000006.1 TPA_asm: Bacteroidales bacterium UBA3297 UBA3297_contig_45565, whole genome shotgun sequence (55668 bp)
Overview 1 RT 1: 15575-27081 bp Neighborhood of RT #1 [15575, 27104] RVT-Retrons PIF1 PIF1 KOG0987 TPR RVT-AbiP2 WYL Feature: gene Location: 15575-15913 bp Feature: gene Location: 16146-17153 bp Feature: gene Location: 17216-18970 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 17402-18020 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 7402-1 8020 bp Feature: gene Location: 19291-20019 bp Feature: gene Location: 20081-22135 bp Feature: domain Description: PIF1 Location: 20117-20720 bp Feature: domain Description: PIF1 Location: 201 1 7-20720 bp Feature: domain Description: PIF1 Location: 20801-21002 bp Feature: domain Description: PIF1 Location: 20801 -21 002 bp Feature: domain Description: KOG0987 Location: 21137-21218 bp Feature: domain Description: KOG0987 Location: 21 1 37-21 21 8 bp Feature: domain Description: TPR Location: 21446-21761 bp Feature: domain Description: TPR Location: 21 446-21 761 bp Feature: gene Location: 22181-22726 bp Feature: gene Location: 22757-23203 bp Feature: gene Location: 23489-25042 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 23915-24374 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2391 5-24374 bp Feature: gene Location: 25078-25809 bp Feature: gene Location: 26025-27104 bp Feature: domain Description: WYL Location: 26541-27081 bp Feature: domain Description: WYL Location: 26541 -27081 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, PIF1 (pfam05970), KOG0987 (KOG0987, DNA helicase PIF1/RRM3 ), TPR (smart00028), RVT-AbiP2, WYL (pfam13280)

Seq: DETD01000009.1 TPA_asm: Bacteroidales bacterium UBA3297 UBA3297_contig_9743, whole genome shotgun sequence (311104 bp)
Overview 1 RT 1: 220982-228570 bp Neighborhood of RT #1 [220982, 228572] DUF481 RVT-UG27 Propeptide_C25 Peptidase_C25 Por_Secre_tail Feature: gene Location: 220982-221722 bp Feature: domain Description: DUF481 Location: 221084-221711 bp Feature: domain Description: DUF481 Location: 2 2 1084-2 2 1711 bp Feature: gene Location: 221869-222690 bp Feature: gene Location: 222750-224411 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 222945-223590 bp Feature: RT Description: RVT-UG2 7 Note: UG2 7 RT Location: 2 2 2 945-2 2 3590 bp Feature: gene Location: 224568-225590 bp Feature: gene Location: 225882-228572 bp Feature: domain Description: Propeptide_C25 Location: 225993-226536 bp Feature: domain Description: Propeptide_C2 5 Location: 2 2 5993-2 2 6536 bp Feature: domain Description: Peptidase_C25 Location: 226605-227763 bp Feature: domain Description: Peptidase_C2 5 Location: 2 2 6605-2 2 7763 bp Feature: domain Description: Por_Secre_tail Location: 228363-228570 bp Feature: domain Description: Por_Secre_tail Location: 2 2 8363-2 2 8570 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF481 (pfam04338), RVT-UG27, Propeptide_C25 (pfam08126), Peptidase_C25 (pfam01364), Por_Secre_tail (TIGR04183)