myRT

myRT report for GCA_002362965.1_ASM236296v1

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Seq: DEVV01000006.1 TPA_asm: Alcaligenes faecalis isolate UBA3227 UBA3227_contig_3, whole genome shotgun sequence (698889 bp)
Overview 1 RT 1: 125103-129410 bp Neighborhood of RT #1 [125103, 129463] Avd_like PHA00653 RVT-DGRs HTH_1 PBP2_CrgA_like_7 Beta-lactamase Feature: gene Location: 125103-125693 bp Feature: domain Description: Avd_like Location: 125358-125610 bp Feature: domain Description: Avd_like Location: 1 25358-1 2561 0 bp Feature: gene Location: 125700-125960 bp Feature: domain Description: PHA00653 Location: 125748-125874 bp Feature: domain Description: PHA00653 Location: 1 25748-1 25874 bp Feature: gene Location: 126041-127081 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 126263-126872 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 26263-1 26872 bp Feature: gene Location: 127199-128155 bp Feature: domain Description: HTH_1 Location: 127214-127388 bp Feature: domain Description: HTH_1 Location: 1 2721 4-1 27388 bp Feature: domain Description: PBP2_CrgA_like_7 Location: 127478-128066 bp Feature: domain Description: PBP2_CrgA_like_7 Location: 1 27478-1 28066 bp Feature: gene Location: 128273-129463 bp Feature: domain Description: Beta-lactamase Location: 128336-129410 bp Feature: domain Description: Beta-lactamase Location: 1 28336-1 2941 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), PHA00653 (mtd;major tropism determinant), RVT-DGRs, HTH_1 (pfam00126), PBP2_CrgA_like_7 (cd08476), Beta-lactamase (pfam00144)

Seq: DEVV01000008.1 TPA_asm: Alcaligenes faecalis isolate UBA3227 UBA3227_contig_5, whole genome shotgun sequence (967396 bp)
Overview 1 RT 1: 881229-884057 bp Neighborhood of RT #1 [881229, 884077] DUF1566 Avd_like RVT-DGRs HTH_23 Feature: gene Location: 881229-881654 bp Feature: domain Description: DUF1566 Location: 881382-881628 bp Feature: domain Description: DUF1566 Location: 881382 -88162 8 bp Feature: gene Location: 881687-882148 bp Feature: domain Description: Avd_like Location: 881714-882020 bp Feature: domain Description: Avd_like Location: 881714-882 02 0 bp Feature: gene Location: 882308-883441 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 882494-883178 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 882 494-883178 bp Feature: gene Location: 883413-883892 bp Feature: gene Location: 883889-884077 bp Feature: domain Description: HTH_23 Location: 883946-884057 bp Feature: domain Description: HTH_2 3 Location: 883946-884057 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1566 (pfam07603), Avd_like (cd16376), RVT-DGRs, HTH_23 (pfam13384)

Seq: DEVV01000010.1 TPA_asm: Alcaligenes faecalis isolate UBA3227 UBA3227_contig_7, whole genome shotgun sequence (257385 bp)
Overview 1 RT 1: 225154-229573 bp Neighborhood of RT #1 [225154, 229599] RVT-DGRs Avd_like DUF1566 Feature: gene Location: 225154-226290 bp Feature: gene Location: 226442-227188 bp Feature: gene Location: 227408-228520 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 227594-228278 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 227594-228278 bp Feature: gene Location: 228680-229141 bp Feature: domain Description: Avd_like Location: 228707-229013 bp Feature: domain Description: Avd_like Location: 228707-229013 bp Feature: gene Location: 229174-229599 bp Feature: domain Description: DUF1566 Location: 229324-229573 bp Feature: domain Description: DUF1566 Location: 2293 24-229573 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376), DUF1566 (pfam07603)