myRT

myRT report for GCA_002368075.1_ASM236807v1

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Seq: AP018314.1 Sphaerospermopsis kisseleviana NIES-73 DNA, nearly complete genome (5354839 bp)
Overview 1 RT 1: 150773-156478 bp 2 RT 2: 493048-497721 bp 3 RT 3: 520806-524347 bp Neighborhood of RT #1 [150773, 156480] DUF433 NERD AAA_30 RVT-UNC PLN03034 USPA Neighborhood of RT #2 [493048, 497738] PRK11880 RVT-UNC HSDR_N_2 DUF29 Neighborhood of RT #3 [520806, 524347] DUF3800 RVT-Retrons Feature: gene Location: 150773-151075 bp Ori: BAZ78878.1 Feature: domain Description: DUF433 Location: 150821-150950 bp Feature: domain Description: DUF433 Location: 1 50821 -1 50950 bp Feature: gene Location: 151328-152980 bp Ori: BAZ78879.1 Feature: domain Description: NERD Location: 151376-151661 bp Feature: domain Description: NERD Location: 1 51 376-1 51 661 bp Feature: domain Description: AAA_30 Location: 151970-152396 bp Feature: domain Description: AAA_30 Location: 1 51 970-1 52396 bp Feature: gene Location: 152977-154674 bp Ori: BAZ78880.1 Feature: RT Description: RVT-UNC Note: UNC RT Location: 153208-153874 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1 53208-1 53874 bp Feature: gene Location: 154781-155983 bp Ori: BAZ78881.1 Feature: domain Description: PLN03034 Location: 154787-155981 bp Feature: domain Description: PLN03034 Location: 1 54787-1 55981 bp Feature: gene Location: 156073-156480 bp Ori: BAZ78882.1 Feature: domain Description: USPA Location: 156082-156478 bp Feature: domain Description: USPA Location: 1 56082-1 56478 bp Feature: gene Location: 493048-493863 bp Ori: BAZ79186.1 Feature: domain Description: PRK11880 Location: 493057-493858 bp Feature: domain Description: PRK1 1 880 Location: 493057-493858 bp Feature: gene Location: 493973-494146 bp Feature: gene Location: 494381-496336 bp Ori: BAZ79188.1 Feature: RT Description: RVT-UNC Note: UNC RT Location: 494828-495239 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 494828-495239 bp Feature: gene Location: 496642-497262 bp Ori: BAZ79189.1 Feature: domain Description: HSDR_N_2 Location: 496912-497167 bp Feature: domain Description: HSDR_N_2 Location: 49691 2-4971 67 bp Feature: gene Location: 497259-497738 bp Ori: BAZ79190.1 Feature: domain Description: DUF29 Location: 497313-497721 bp Feature: domain Description: DUF29 Location: 49731 3-497721 bp Feature: gene Location: 520806-520979 bp Feature: gene Location: 521111-521836 bp Ori: BAZ79212.1 Feature: domain Description: DUF3800 Location: 521132-521696 bp Feature: domain Description: DUF3800 Location: 521 1 32-521 696 bp Feature: gene Location: 521988-523010 bp Ori: BAZ79213.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 522135-522663 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5221 35-522663 bp Feature: gene Location: 523587-523757 bp Feature: gene Location: 523754-524347 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF433 (pfam04255), NERD (pfam08378), AAA_30 (pfam13604), RVT-UG11/RVT-UG9/RVT-UG19/RVT-CRISPR(RVT-UNC), PLN03034 (phosphoglycerate kinase; Provisional), USPA (LOAD_USPA), PRK11880 (pyrroline-5-carboxylate reductase; Reviewed), RVT-AbiA/RVT-UG9/RVT-CRISPR/RVT-GII(RVT-UNC), HSDR_N_2 (pfam13588), DUF29 (pfam01724)
DUF3800 (pfam12686), RVT-Retrons