myRT

myRT report for GCA_002368095.1_ASM236809v1

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Seq: AP018227.1 Calothrix parasitica NIES-267 DNA, nearly complete genome (8952435 bp)
Overview 1 RT 1: 126974-132589 bp 2 RT 2: 3051605-3059019 bp 3 RT 3: 4940185-4945360 bp 4 RT 4: 4949954-4955378 bp 5 RT 5: 5136404-5141648 bp 6 RT 6: 5307716-5313162 bp 7 RT 7: 5421146-5428317 bp 8 RT 8: 8327400-8335891 bp 9 RT 9: 8896404-8904313 bp Neighborhood of RT #1 [126974, 132609] Delta9-FADS-like Hit RVT_N RVT-GII RVT-GII GIIM McrA TIGR00368 Neighborhood of RT #2 [3051605, 3059123] COG4249 Uma2 RVT-Retrons W_rich_C FG-GAP FG-GAP FG-GAP FG-GAP FG-GAP FG-GAP FG-GAP FG-GAP FG-GAP FG-GAP FG-GAP Neighborhood of RT #3 [4940185, 4945360] ComA-like_MBL-fold ComA-like_MBL-fold WYL RVT-UG12 Neighborhood of RT #4 [4949954, 4955554] RVT_N RVT-GII GIIM McrA FtsK Neighborhood of RT #5 [5136404, 5141851] RVT_N RVT-GII GIIM McrA FtsK Neighborhood of RT #6 [5307716, 5313162] UBA_Cbl_like FtsK RVT_N RVT-GII GIIM McrA Neighborhood of RT #7 [5421146, 5428364] TraC-F-type TraC-F-type RVT_N RVT-GII GIIM McrA DUF820 Neighborhood of RT #8 [8327400, 8335917] CheY PRK12928 RVT_N RVT-GII RVT-GII GIIM McrA PLN02751 TMAO_torS COG1606 Neighborhood of RT #9 [8896404, 8904474] OpuBB PBP2_Opu_like_2 RVT_N RVT-GII GIIM HNHc crtI_fam HTH_MARR Feature: gene Location: 126974-127885 bp Ori: BAY80647.1 Feature: domain Description: Delta9-FADS-like Location: 127088-127784 bp Feature: domain Description: Delta9-FADS-like Location: 1 27088-1 27784 bp Feature: gene Location: 127992-128234 bp Ori: BAY80648.1 Gene: hit_2 Feature: domain Description: Hit Location: 127995-128214 bp Feature: domain Description: Hit Location: 1 27995-1 2821 4 bp Feature: gene Location: 128943-130457 bp Ori: BAY80649.1 Feature: domain Description: RVT_N Location: 128979-129222 bp Feature: domain Description: RVT_N Location: 1 28979-1 29222 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 129276-129705 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 29276-1 29705 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 129711-129876 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 2971 1 -1 29876 bp Feature: domain Description: GIIM Note: maturase Location: 129936-130092 bp Feature: domain Description: GIIM Note: maturase Location: 1 29936-1 30092 bp Feature: domain Description: McrA Location: 130185-130428 bp Feature: domain Description: McrA Location: 1 301 85-1 30428 bp Feature: gene Location: 130584-130778 bp Feature: gene Location: 131071-132609 bp Ori: BAY80651.1 Feature: domain Description: TIGR00368 Location: 131086-132589 bp Feature: domain Description: TIGR00368 Location: 1 31 086-1 32589 bp Feature: gene Location: 3051605-3053515 bp Ori: BAY82873.1 Feature: domain Description: COG4249 Location: 3051608-3052316 bp Feature: domain Description: COG4249 Location: 3051 608-305231 6 bp Feature: gene Location: 3053659-3054282 bp Ori: BAY82874.1 Feature: domain Description: Uma2 Location: 3053707-3054262 bp Feature: domain Description: Uma2 Location: 3053707-3054262 bp Feature: gene Location: 3054546-3055955 bp Ori: BAY82875.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3055095-3055710 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3055095-305571 0 bp Feature: gene Location: 3056121-3057344 bp Ori: BAY82876.1 Feature: domain Description: W_rich_C Location: 3056310-3056415 bp Feature: domain Description: W_rich_C Location: 305631 0-305641 5 bp Feature: domain Description: FG-GAP Location: 3056463-3056541 bp Feature: domain Description: FG-GAP Location: 3056463-3056541 bp Feature: domain Description: FG-GAP Location: 3056607-3056697 bp Feature: domain Description: FG-GAP Location: 3056607-3056697 bp Feature: domain Description: FG-GAP Location: 3056763-3056835 bp Feature: domain Description: FG-GAP Location: 3056763-3056835 bp Feature: domain Description: FG-GAP Location: 3056901-3056982 bp Feature: domain Description: FG-GAP Location: 3056901 -3056982 bp Feature: domain Description: FG-GAP Location: 3057048-3057099 bp Feature: domain Description: FG-GAP Location: 3057048-3057099 bp Feature: domain Description: FG-GAP Location: 3057192-3057270 bp Feature: domain Description: FG-GAP Location: 30571 92-3057270 bp Feature: gene Location: 3057927-3059123 bp Ori: BAY82877.1 Feature: domain Description: FG-GAP Location: 3058134-3058164 bp Feature: domain Description: FG-GAP Location: 30581 34-30581 64 bp Feature: domain Description: FG-GAP Location: 3058275-3058335 bp Feature: domain Description: FG-GAP Location: 3058275-3058335 bp Feature: domain Description: FG-GAP Location: 3058407-3058497 bp Feature: domain Description: FG-GAP Location: 3058407-3058497 bp Feature: domain Description: FG-GAP Location: 3058830-3058923 bp Feature: domain Description: FG-GAP Location: 3058830-3058923 bp Feature: domain Description: FG-GAP Location: 3058974-3059019 bp Feature: domain Description: FG-GAP Location: 3058974-305901 9 bp Feature: gene Location: 4940185-4941366 bp Ori: BAY84373.1 Feature: domain Description: ComA-like_MBL-fold Location: 4940200-4940431 bp Feature: domain Description: ComA-like_MBL-fold Location: 4940200-4940431 bp Feature: domain Description: ComA-like_MBL-fold Location: 4940815-4941001 bp Feature: domain Description: ComA-like_MBL-fold Location: 494081 5-4941 001 bp Feature: gene Location: 4941478-4942344 bp Ori: BAY84374.1 Feature: domain Description: WYL Location: 4941829-4942303 bp Feature: domain Description: WYL Location: 4941 829-4942303 bp Feature: gene Location: 4942429-4944000 bp Ori: BAY84375.1 Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 4942789-4943236 bp Feature: RT Description: RVT-UG1 2 Note: UG1 2 RT Location: 4942789-4943236 bp Feature: gene Location: 4944373-4944765 bp Feature: gene Location: 4944731-4945360 bp Feature: gene Location: 4949954-4950379 bp Feature: gene Location: 4950404-4950670 bp Feature: gene Location: 4951241-4952983 bp Ori: BAY84386.1 Feature: domain Description: RVT_N Location: 4951253-4951499 bp Feature: domain Description: RVT_N Location: 4951 253-4951 499 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4951541-4952240 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4951 541 -4952240 bp Feature: domain Description: GIIM Note: maturase Location: 4952318-4952552 bp Feature: domain Description: GIIM Note: maturase Location: 495231 8-4952552 bp Feature: domain Description: McrA Location: 4952633-4952909 bp Feature: domain Description: McrA Location: 4952633-4952909 bp Feature: gene Location: 4953243-4953542 bp Feature: gene Location: 4953542-4955554 bp Ori: BAY84388.1 Feature: domain Description: FtsK Location: 4954205-4955378 bp Feature: domain Description: FtsK Location: 4954205-4955378 bp Feature: gene Location: 5136404-5136742 bp Feature: gene Location: 5136739-5136969 bp Feature: gene Location: 5137540-5139282 bp Ori: BAY84523.1 Feature: domain Description: RVT_N Location: 5137552-5137798 bp Feature: domain Description: RVT_N Location: 51 37552-51 37798 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5137840-5138539 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51 37840-51 38539 bp Feature: domain Description: GIIM Note: maturase Location: 5138617-5138851 bp Feature: domain Description: GIIM Note: maturase Location: 51 3861 7-51 38851 bp Feature: domain Description: McrA Location: 5138932-5139208 bp Feature: domain Description: McrA Location: 51 38932-51 39208 bp Feature: gene Location: 5139276-5139842 bp Feature: gene Location: 5139842-5141851 bp Ori: BAY84525.1 Feature: domain Description: FtsK Location: 5140499-5141648 bp Feature: domain Description: FtsK Location: 51 40499-51 41 648 bp Feature: gene Location: 5307716-5309725 bp Ori: BAY84656.1 Feature: domain Description: UBA_Cbl_like Location: 5307926-5307971 bp Feature: domain Description: UBA_Cbl_like Location: 5307926-5307971 bp Feature: domain Description: FtsK Location: 5308352-5309510 bp Feature: domain Description: FtsK Location: 5308352-530951 0 bp Feature: gene Location: 5309725-5310120 bp Feature: gene Location: 5310284-5312026 bp Ori: BAY84658.1 Feature: domain Description: RVT_N Location: 5310296-5310542 bp Feature: domain Description: RVT_N Location: 531 0296-531 0542 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5310584-5311283 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 531 0584-531 1 283 bp Feature: domain Description: GIIM Note: maturase Location: 5311361-5311595 bp Feature: domain Description: GIIM Note: maturase Location: 531 1 361 -531 1 595 bp Feature: domain Description: McrA Location: 5311676-5311952 bp Feature: domain Description: McrA Location: 531 1 676-531 1 952 bp Feature: gene Location: 5312597-5312827 bp Feature: gene Location: 5312827-5313162 bp Feature: gene Location: 5421146-5423854 bp Ori: BAY84745.1 Feature: domain Description: TraC-F-type Location: 5422157-5422742 bp Feature: domain Description: TraC-F-type Location: 54221 57-5422742 bp Feature: domain Description: TraC-F-type Location: 5423381-5423846 bp Feature: domain Description: TraC-F-type Location: 5423381 -5423846 bp Feature: gene Location: 5423851-5424174 bp Feature: gene Location: 5424537-5426408 bp Ori: BAY84747.1 Feature: domain Description: RVT_N Location: 5424645-5424891 bp Feature: domain Description: RVT_N Location: 5424645-5424891 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5424933-5425611 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5424933-542561 1 bp Feature: domain Description: GIIM Note: maturase Location: 5425713-5425944 bp Feature: domain Description: GIIM Note: maturase Location: 542571 3-5425944 bp Feature: domain Description: McrA Location: 5426043-5426298 bp Feature: domain Description: McrA Location: 5426043-5426298 bp Feature: gene Location: 5426971-5427462 bp Feature: gene Location: 5428137-5428364 bp Ori: BAY84749.1 Feature: domain Description: DUF820 Location: 5428161-5428317 bp Feature: domain Description: DUF820 Location: 54281 61 -542831 7 bp Feature: gene Location: 8327400-8328008 bp Ori: BAY87091.1 Feature: domain Description: CheY Location: 8327412-8327772 bp Feature: domain Description: CheY Location: 832741 2-8327772 bp Feature: gene Location: 8328679-8329557 bp Ori: BAY87092.1 Feature: domain Description: PRK12928 Location: 8328694-8329549 bp Feature: domain Description: PRK1 2928 Location: 8328694-8329549 bp Feature: gene Location: 8330305-8331852 bp Ori: BAY87093.1 Feature: domain Description: RVT_N Location: 8330341-8330578 bp Feature: domain Description: RVT_N Location: 8330341 -8330578 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8330635-8331091 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8330635-8331 091 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8331091-8331253 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8331 091 -8331 253 bp Feature: domain Description: GIIM Note: maturase Location: 8331313-8331496 bp Feature: domain Description: GIIM Note: maturase Location: 8331 31 3-8331 496 bp Feature: domain Description: McrA Location: 8331541-8331811 bp Feature: domain Description: McrA Location: 8331 541 -8331 81 1 bp Feature: gene Location: 8333107-8335002 bp Ori: BAY87094.1 Feature: domain Description: PLN02751 Location: 8333233-8333575 bp Feature: domain Description: PLN02751 Location: 8333233-8333575 bp Feature: domain Description: TMAO_torS Location: 8333776-8334991 bp Feature: domain Description: TMAO_torS Location: 8333776-8334991 bp Feature: gene Location: 8335093-8335917 bp Ori: BAY87095.1 Feature: domain Description: COG1606 Location: 8335096-8335891 bp Feature: domain Description: COG1 606 Location: 8335096-8335891 bp Feature: gene Location: 8896404-8897039 bp Ori: BAY87548.1 Feature: domain Description: OpuBB Location: 8896431-8897028 bp Feature: domain Description: OpuBB Location: 8896431 -8897028 bp Feature: gene Location: 8897365-8898261 bp Ori: BAY87549.1 Feature: domain Description: PBP2_Opu_like_2 Location: 8897464-8898247 bp Feature: domain Description: PBP2_Opu_like_2 Location: 8897464-8898247 bp Feature: gene Location: 8900245-8901966 bp Ori: BAY87550.1 Feature: domain Description: RVT_N Location: 8900293-8900533 bp Feature: domain Description: RVT_N Location: 8900293-8900533 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8900587-8901226 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8900587-8901 226 bp Feature: domain Description: GIIM Note: maturase Location: 8901304-8901532 bp Feature: domain Description: GIIM Note: maturase Location: 8901 304-8901 532 bp Feature: domain Description: HNHc Note: nucleases Location: 8901745-8901895 bp Feature: domain Description: HNHc Note: nucleases Location: 8901 745-8901 895 bp Feature: gene Location: 8902159-8903652 bp Ori: BAY87551.1 Feature: domain Description: crtI_fam Location: 8902177-8903644 bp Feature: domain Description: crtI_fam Location: 89021 77-8903644 bp Feature: gene Location: 8903947-8904474 bp Ori: BAY87552.1 Feature: domain Description: HTH_MARR Location: 8904040-8904313 bp Feature: domain Description: HTH_MARR Location: 8904040-890431 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Delta9-FADS-like (cd03505), Hit (COG0537), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), TIGR00368 (Mg chelatase-related protein), COG4249 (Uncharacterized protein, contains caspase domain ), Uma2 (pfam05685), RVT-Retrons
W_rich_C (pfam07483), FG-GAP (pfam01839), ComA-like_MBL-fold (cd07731), WYL (pfam13280), RVT-UG12, FtsK (COG1674), UBA_Cbl_like (cd14318), TraC-F-type (TIGR02746), DUF820, CheY (COG0784)
PRK12928 (lipoyl synthase; Provisional), PLN02751 (glutamyl-tRNA(Gln) amidotransferase), TMAO_torS (TIGR02956), COG1606 (ATP-utilizing enzyme, PP-loop superfamily ), OpuBB (COG1174), PBP2_Opu_like_2 (cd13613), HNHc (smart00507), crtI_fam (TIGR02734), HTH_MARR (smart00347)

Seq: AP018228.1 Calothrix parasitica NIES-267 plasmid plasmid1 DNA, complete genome (271562 bp)
Overview 1 RT 1: 162339-198816 bp Neighborhood of RT #1 [162339, 199208] AAA_22 xerC RVT_N RVT-GII RVT-GII GIIM McrA RVT_N RVT-GII RVT-GII GIIM McrA Big_6 Big_6 Big_3_3 Big_6 Big_3_3 Big_6 Big_3_3 Big_6 Big_3_3 Big_6 Cadherin_repeat He_PIG Cadherin_repeat tand_rpt_95 Cadherin_repeat Big_9 Big_9 Big_9 Big_9 Big_7 RHS_repeat RHS_repeat RHS_repeat RHS_repeat RHS_repeat RHS_repeat RHS_repeat RHS_repeat RHS_repeat RHS_repeat YD_repeat_2x RHS_repeat YD_repeat_2x RHS_repeat RHS_repeat RHS_repeat RHS_repeat RHS_repeat Rhs_assc_core PT-HINT Feature: gene Location: 162339-163892 bp Ori: BAY87743.1 Feature: domain Description: AAA_22 Location: 162444-162885 bp Feature: domain Description: AAA_2 2 Location: 162 444-162 885 bp Feature: gene Location: 164416-165423 bp Ori: BAY87744.1 Feature: domain Description: xerC Location: 164515-165259 bp Feature: domain Description: xerC Location: 164515-1652 59 bp Feature: gene Location: 165887-167401 bp Ori: BAY87745.1 Feature: domain Description: RVT_N Location: 165923-166166 bp Feature: domain Description: RVT_N Location: 16592 3-166166 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 166220-166649 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1662 2 0-166649 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 166655-166820 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 166655-16682 0 bp Feature: domain Description: GIIM Note: maturase Location: 166880-167036 bp Feature: domain Description: GIIM Note: maturase Location: 166880-167036 bp Feature: domain Description: McrA Location: 167129-167372 bp Feature: domain Description: McrA Location: 16712 9-167372 bp Feature: gene Location: 168017-168166 bp Feature: gene Location: 168520-169239 bp Feature: gene Location: 169616-171244 bp Feature: gene Location: 171859-173373 bp Ori: BAY87749.1 Feature: domain Description: RVT_N Location: 171895-172138 bp Feature: domain Description: RVT_N Location: 171895-172 138 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 172192-172621 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 172 192 -172 62 1 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 172627-172792 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 172 62 7-172 792 bp Feature: domain Description: GIIM Note: maturase Location: 172852-173008 bp Feature: domain Description: GIIM Note: maturase Location: 172 852 -173008 bp Feature: domain Description: McrA Location: 173101-173344 bp Feature: domain Description: McrA Location: 173101-173344 bp Feature: gene Location: 174286-174660 bp Feature: gene Location: 174906-199208 bp Ori: BAY87751.1 Feature: domain Description: Big_6 Location: 177537-177726 bp Feature: domain Description: Big_6 Location: 177537-17772 6 bp Feature: domain Description: Big_6 Location: 177840-178029 bp Feature: domain Description: Big_6 Location: 177840-17802 9 bp Feature: domain Description: Big_3_3 Location: 178587-178752 bp Feature: domain Description: Big_3_3 Location: 178587-178752 bp Feature: domain Description: Big_6 Location: 178752-178947 bp Feature: domain Description: Big_6 Location: 178752 -178947 bp Feature: domain Description: Big_3_3 Location: 179148-179376 bp Feature: domain Description: Big_3_3 Location: 179148-179376 bp Feature: domain Description: Big_6 Location: 179682-179886 bp Feature: domain Description: Big_6 Location: 179682 -179886 bp Feature: domain Description: Big_3_3 Location: 180078-180501 bp Feature: domain Description: Big_3_3 Location: 180078-180501 bp Feature: domain Description: Big_6 Location: 180600-180804 bp Feature: domain Description: Big_6 Location: 180600-180804 bp Feature: domain Description: Big_3_3 Location: 180993-181143 bp Feature: domain Description: Big_3_3 Location: 180993-181143 bp Feature: domain Description: Big_6 Location: 181542-181719 bp Feature: domain Description: Big_6 Location: 181542 -181719 bp Feature: domain Description: Cadherin_repeat Location: 181767-182028 bp Feature: domain Description: Cadherin_repeat Location: 181767-182 02 8 bp Feature: domain Description: He_PIG Location: 182133-182283 bp Feature: domain Description: He_PIG Location: 182 133-182 2 83 bp Feature: domain Description: Cadherin_repeat Location: 183204-183408 bp Feature: domain Description: Cadherin_repeat Location: 1832 04-183408 bp Feature: domain Description: tand_rpt_95 Location: 189918-190113 bp Feature: domain Description: tand_rpt_95 Location: 189918-190113 bp Feature: domain Description: Cadherin_repeat Location: 191532-191712 bp Feature: domain Description: Cadherin_repeat Location: 191532 -191712 bp Feature: domain Description: Big_9 Location: 191712-191964 bp Feature: domain Description: Big_9 Location: 191712 -191964 bp Feature: domain Description: Big_9 Location: 191976-192243 bp Feature: domain Description: Big_9 Location: 191976-192 2 43 bp Feature: domain Description: Big_9 Location: 192261-192513 bp Feature: domain Description: Big_9 Location: 192 2 61-192 513 bp Feature: domain Description: Big_9 Location: 192849-193095 bp Feature: domain Description: Big_9 Location: 192 849-193095 bp Feature: domain Description: Big_7 Location: 193182-193305 bp Feature: domain Description: Big_7 Location: 193182 -193305 bp Feature: domain Description: RHS_repeat Location: 194262-194406 bp Feature: domain Description: RHS_repeat Location: 1942 62 -194406 bp Feature: domain Description: RHS_repeat Location: 194424-194493 bp Feature: domain Description: RHS_repeat Location: 19442 4-194493 bp Feature: domain Description: RHS_repeat Location: 194652-194730 bp Feature: domain Description: RHS_repeat Location: 194652 -194730 bp Feature: domain Description: RHS_repeat Location: 194745-194844 bp Feature: domain Description: RHS_repeat Location: 194745-194844 bp Feature: domain Description: RHS_repeat Location: 194871-194976 bp Feature: domain Description: RHS_repeat Location: 194871-194976 bp Feature: domain Description: RHS_repeat Location: 195000-195105 bp Feature: domain Description: RHS_repeat Location: 195000-195105 bp Feature: domain Description: RHS_repeat Location: 195270-195345 bp Feature: domain Description: RHS_repeat Location: 1952 70-195345 bp Feature: domain Description: RHS_repeat Location: 195468-195561 bp Feature: domain Description: RHS_repeat Location: 195468-195561 bp Feature: domain Description: RHS_repeat Location: 195618-195699 bp Feature: domain Description: RHS_repeat Location: 195618-195699 bp Feature: domain Description: RHS_repeat Location: 195870-195963 bp Feature: domain Description: RHS_repeat Location: 195870-195963 bp Feature: domain Description: YD_repeat_2x Location: 195996-196089 bp Feature: domain Description: YD_repeat_2 x Location: 195996-196089 bp Feature: domain Description: RHS_repeat Location: 196272-196377 bp Feature: domain Description: RHS_repeat Location: 1962 72 -196377 bp Feature: domain Description: YD_repeat_2x Location: 196398-196509 bp Feature: domain Description: YD_repeat_2 x Location: 196398-196509 bp Feature: domain Description: RHS_repeat Location: 196530-196626 bp Feature: domain Description: RHS_repeat Location: 196530-19662 6 bp Feature: domain Description: RHS_repeat Location: 196656-196752 bp Feature: domain Description: RHS_repeat Location: 196656-196752 bp Feature: domain Description: RHS_repeat Location: 196779-196875 bp Feature: domain Description: RHS_repeat Location: 196779-196875 bp Feature: domain Description: RHS_repeat Location: 196923-197034 bp Feature: domain Description: RHS_repeat Location: 19692 3-197034 bp Feature: domain Description: RHS_repeat Location: 197055-197136 bp Feature: domain Description: RHS_repeat Location: 197055-197136 bp Feature: domain Description: Rhs_assc_core Location: 197559-197796 bp Feature: domain Description: Rhs_assc_core Location: 197559-197796 bp Feature: domain Description: PT-HINT Location: 198435-198816 bp Feature: domain Description: PT-HINT Location: 198435-198816 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_22 (pfam13401), xerC (PRK01287), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), Big_6 (pfam17936), Big_3_3 (pfam13750), Cadherin_repeat (cd11304), He_PIG (pfam05345)
tand_rpt_95 (NF012211), Big_9 (pfam17963), Big_7 (pfam17957), RHS_repeat (pfam05593), YD_repeat_2x (TIGR01643), Rhs_assc_core (TIGR03696), PT-HINT (pfam07591)

Seq: AP018230.1 Calothrix parasitica NIES-267 plasmid plasmid3 DNA, complete genome (75777 bp)
Overview 1 RT 1: 20940-26889 bp Neighborhood of RT #1 [20940, 26889] RVT_N RVT-GII GIIM McrA Feature: gene Location: 20940-21281 bp Feature: gene Location: 21285-21695 bp Feature: gene Location: 22218-23789 bp Ori: BAY87924.1 Feature: domain Description: RVT_N Location: 22257-22497 bp Feature: domain Description: RVT_N Location: 22257-22497 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22554-23202 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22554-23 202 bp Feature: domain Description: GIIM Note: maturase Location: 23256-23454 bp Feature: domain Description: GIIM Note: maturase Location: 23 256-23 454 bp Feature: domain Description: McrA Location: 23517-23757 bp Feature: domain Description: McrA Location: 23 517-23 757 bp Feature: gene Location: 23936-24688 bp Feature: gene Location: 24901-26889 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)