myRT

myRT report for GCA_002368135.1_ASM236813v1

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Seq: AP018317.1 Raphidiopsis curvata NIES-932 DNA, nearly complete genome (3431981 bp)
Overview 1 RT 1: 243345-248714 bp 2 RT 2: 2202757-2209360 bp 3 RT 3: 2676761-2682702 bp 4 RT 4: 2967166-2970648 bp Neighborhood of RT #1 [243345, 248746] DppC KOG0404 TRX_NTR RVT_N RVT-GII GIIM KOG0404 N_methyl Pilin_GH Neighborhood of RT #2 [2202757, 2209374] MviM QueC RVT_N RVT-GII GIIM DUF3157 TlyC Neighborhood of RT #3 [2676761, 2682702] DUF3598 RTPR RVT-GII GIIM RNR_II_monomer Neighborhood of RT #4 [2967166, 2970665] cyt_b559_alpha CpeS RVT_N RVT-GII GIIM CpeS HEAT Feature: gene Location: 243345-244226 bp Feature: domain Description: DppC Location: 243393-244218 bp Feature: domain Description: DppC Location: 243393-24421 8 bp Feature: gene Location: 244363-245517 bp Feature: domain Description: KOG0404 Location: 244366-245098 bp Feature: domain Description: KOG0404 Location: 244366-245098 bp Feature: domain Description: TRX_NTR Location: 245218-245503 bp Feature: domain Description: TRX_NTR Location: 24521 8-245503 bp Feature: gene Location: 245583-247166 bp Feature: RT Description: RVT_N Location: 245667-245850 bp Feature: RT Description: RVT_N Location: 245667-245850 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 245925-246546 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 245925-246546 bp Feature: domain Description: GIIM Note: maturase Location: 246681-246903 bp Feature: domain Description: GIIM Note: maturase Location: 246681 -246903 bp Feature: gene Location: 247819-248007 bp Feature: domain Description: KOG0404 Location: 247849-247996 bp Feature: domain Description: KOG0404 Location: 247849-247996 bp Feature: gene Location: 248222-248746 bp Feature: domain Description: N_methyl Location: 248282-248351 bp Feature: domain Description: N_methyl Location: 248282-248351 bp Feature: domain Description: Pilin_GH Location: 248387-248714 bp Feature: domain Description: Pilin_GH Location: 248387-24871 4 bp Feature: gene Location: 2202757-2203836 bp Feature: domain Description: MviM Location: 2202823-2203768 bp Feature: domain Description: MviM Location: 2202823-2203768 bp Feature: gene Location: 2204030-2204698 bp Feature: domain Description: QueC Location: 2204033-2204690 bp Feature: domain Description: QueC Location: 2204033-2204690 bp Feature: gene Location: 2204831-2206525 bp Feature: RT Description: RVT_N Location: 2204858-2205086 bp Feature: RT Description: RVT_N Location: 2204858-2205086 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2205122-2205803 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22051 22-2205803 bp Feature: domain Description: GIIM Note: maturase Location: 2205905-2206136 bp Feature: domain Description: GIIM Note: maturase Location: 2205905-22061 36 bp Feature: gene Location: 2207192-2207896 bp Feature: domain Description: DUF3157 Location: 2207570-2207726 bp Feature: domain Description: DUF31 57 Location: 2207570-2207726 bp Feature: gene Location: 2207992-2209374 bp Feature: domain Description: TlyC Location: 2208031-2209360 bp Feature: domain Description: TlyC Location: 2208031 -2209360 bp Feature: gene Location: 2676761-2677615 bp Feature: domain Description: DUF3598 Location: 2676770-2677601 bp Feature: domain Description: DUF3598 Location: 2676770-2677601 bp Feature: gene Location: 2677641-2679584 bp Feature: domain Description: RTPR Location: 2677644-2679558 bp Feature: domain Description: RTPR Location: 2677644-2679558 bp Feature: gene Location: 2679780-2681063 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2680014-2680599 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 268001 4-2680599 bp Feature: domain Description: GIIM Note: maturase Location: 2680686-2680920 bp Feature: domain Description: GIIM Note: maturase Location: 2680686-2680920 bp Feature: gene Location: 2681642-2681905 bp Feature: domain Description: RNR_II_monomer Location: 2681705-2681900 bp Feature: domain Description: RNR_II_monomer Location: 2681 705-2681 900 bp Feature: gene Location: 2682094-2682702 bp Feature: gene Location: 2967166-2967414 bp Feature: domain Description: cyt_b559_alpha Location: 2967172-2967403 bp Feature: domain Description: cyt_b559_alpha Location: 29671 72-2967403 bp Feature: gene Location: 2967568-2967822 bp Feature: domain Description: CpeS Location: 2967571-2967769 bp Feature: domain Description: CpeS Location: 2967571 -2967769 bp Feature: gene Location: 2967985-2969112 bp Feature: RT Description: RVT_N Location: 2968021-2968192 bp Feature: RT Description: RVT_N Location: 2968021 -29681 92 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2968213-2968732 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 296821 3-2968732 bp Feature: domain Description: GIIM Note: maturase Location: 2968792-2968990 bp Feature: domain Description: GIIM Note: maturase Location: 2968792-2968990 bp Feature: gene Location: 2969636-2969902 bp Feature: domain Description: CpeS Location: 2969642-2969870 bp Feature: domain Description: CpeS Location: 2969642-2969870 bp Feature: gene Location: 2969994-2970665 bp Feature: domain Description: HEAT Location: 2970009-2970648 bp Feature: domain Description: HEAT Location: 2970009-2970648 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DppC (COG1173), KOG0404 (KOG0404, Thioredoxin reductase ), TRX_NTR (cd02949), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), N_methyl (pfam07963), Pilin_GH (pfam16734), MviM (COG0673), QueC (pfam06508)
DUF3157 (pfam11355), TlyC (COG1253), DUF3598 (pfam12204), RTPR (TIGR02505), RNR_II_monomer (cd01676), cyt_b559_alpha (TIGR01332), CpeS (pfam09367), HEAT (sd00044)