myRT

myRT report for GCA_002368335.1_ASM236833v1

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Seq: AP018288.1 Nostoc sp. NIES-4103 DNA, nearly complete genome (8419969 bp)
Overview 1 RT 1: 397177-404043 bp 2 RT 2: 7767780-7775707 bp Neighborhood of RT #1 [397177, 404043] Peptidase_C14 COG5635 HEAT_2 HEAT_2 HEAT_2 HEAT_2 RVT-Retrons RVT-Retrons HNH Neighborhood of RT #2 [7767780, 7775709] desat_CrtD RVT_N RVT-GII GIIM McrA PqqL FN3K Feature: gene Location: 397177-398145 bp Feature: domain Description: Peptidase_C14 Location: 397201-397939 bp Feature: domain Description: Peptidase_C1 4 Location: 397201 -397939 bp Feature: gene Location: 398173-401652 bp Feature: domain Description: COG5635 Location: 398437-399862 bp Feature: domain Description: COG5635 Location: 398437-399862 bp Feature: domain Description: HEAT_2 Location: 400003-400240 bp Feature: domain Description: HEAT_2 Location: 400003-400240 bp Feature: domain Description: HEAT_2 Location: 400768-400996 bp Feature: domain Description: HEAT_2 Location: 400768-400996 bp Feature: domain Description: HEAT_2 Location: 401122-401284 bp Feature: domain Description: HEAT_2 Location: 401 1 22-401 284 bp Feature: domain Description: HEAT_2 Location: 401332-401545 bp Feature: domain Description: HEAT_2 Location: 401 332-401 545 bp Feature: gene Location: 401713-403044 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 402055-402202 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 402055-402202 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 402286-402802 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 402286-402802 bp Feature: gene Location: 403306-403761 bp Feature: domain Description: HNH Note: nucleases Location: 403375-403516 bp Feature: domain Description: HNH Note: nucleases Location: 403375-40351 6 bp Feature: gene Location: 403765-404043 bp Feature: gene Location: 7767780-7768154 bp Feature: gene Location: 7768439-7769962 bp Feature: domain Description: desat_CrtD Location: 7768475-7769948 bp Feature: domain Description: desat_CrtD Location: 7768475-7769948 bp Feature: gene Location: 7770773-7772488 bp Feature: RT Description: RVT_N Location: 7770812-7771058 bp Feature: RT Description: RVT_N Location: 777081 2-7771 058 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7771100-7771778 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7771 1 00-7771 778 bp Feature: domain Description: GIIM Note: maturase Location: 7771880-7772114 bp Feature: domain Description: GIIM Note: maturase Location: 7771 880-77721 1 4 bp Feature: domain Description: McrA Location: 7772204-7772471 bp Feature: domain Description: McrA Location: 7772204-7772471 bp Feature: gene Location: 7773468-7774754 bp Feature: domain Description: PqqL Location: 7773495-7774749 bp Feature: domain Description: PqqL Location: 7773495-7774749 bp Feature: gene Location: 7774846-7775709 bp Feature: domain Description: FN3K Location: 7774849-7775707 bp Feature: domain Description: FN3K Location: 7774849-7775707 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Peptidase_C14 (pfam00656), COG5635 (Predicted NTPase, NACHT family domain ), HEAT_2 (pfam13646), RVT-Retrons, HNH (pfam01844), desat_CrtD (TIGR02733), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)
PqqL (COG0612), FN3K (COG3001)