myRT

myRT report for GCA_002369705.1_ASM236970v1

Download annotations/find similar RTs

Seq: MWUR01000017.1 Staphylococcus delphini strain 15S02591-1 NODE_17_length_62869_cov_72.3365_ID_33, whole genome shotgun sequence (62869 bp)
Overview 1 RT 1: 53417-58740 bp Neighborhood of RT #1 [53417, 58799] YdiL PRK09183 PRK09183 RVT-GII CcmA Feature: gene Location: 53417-54241 bp Feature: domain Description: YdiL Location: 53432-54065 bp Feature: domain Description: YdiL Location: 53432-54065 bp Feature: gene Location: 54642-55379 bp Feature: domain Description: PRK09183 Location: 54792-55026 bp Feature: domain Description: PRK091 83 Location: 54792-55026 bp Feature: domain Description: PRK09183 Location: 55257-55347 bp Feature: domain Description: PRK091 83 Location: 55257-55347 bp Feature: gene Location: 55747-57031 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 55963-56575 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 55963-56575 bp Feature: gene Location: 57161-57916 bp Feature: gene Location: 57918-58799 bp Feature: domain Description: CcmA Location: 57924-58740 bp Feature: domain Description: CcmA Location: 57924-58740 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YdiL (COG1266), PRK09183 (transposase/IS protein; Provisional), RVT-GII, CcmA (COG4133)

Seq: MWUR01000011.1 Staphylococcus delphini strain 15S02591-1 NODE_11_length_104778_cov_68.9726_ID_21, whole genome shotgun sequence (104778 bp)
Overview 1 RT 1: 58983-65116 bp Neighborhood of RT #1 [58983, 65184] MFS_MefA_like Uup Uup RVT-GII YdiL DUF3267 Feature: gene Location: 58983-60173 bp Feature: domain Description: MFS_MefA_like Location: 58998-60138 bp Feature: domain Description: MFS_MefA_like Location: 58998-60138 bp Feature: gene Location: 60151-61560 bp Feature: domain Description: Uup Location: 60190-60370 bp Feature: domain Description: Uup Location: 60190-60370 bp Feature: domain Description: Uup Location: 60421-61537 bp Feature: domain Description: Uup Location: 6042 1-61537 bp Feature: gene Location: 62140-62905 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62356-62545 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62 356-62 545 bp Feature: gene Location: 63277-64140 bp Feature: domain Description: YdiL Location: 63346-63958 bp Feature: domain Description: YdiL Location: 63346-63958 bp Feature: gene Location: 64642-65184 bp Feature: domain Description: DUF3267 Location: 64813-65116 bp Feature: domain Description: DUF32 67 Location: 64813-65116 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_MefA_like (cd06173), Uup (COG0488), RVT-GII, YdiL (COG1266), DUF3267 (pfam11667)

Seq: MWUR01000028.1 Staphylococcus delphini strain 15S02591-1 NODE_28_length_13778_cov_73.1031_ID_55, whole genome shotgun sequence (13778 bp)
Overview 1 RT 1: 1-4402 bp Neighborhood of RT #1 [1, 4518] HTH_Tnp_1 PRK09183 RVT-GII GIIM M20_ArgE_RocB DUF3139 Feature: gene Location: 1-149 bp Feature: domain Description: HTH_Tnp_1 Location: 7-142 bp Feature: domain Description: HTH_Tnp_1 Location: 7-142 bp Feature: gene Location: 519-1094 bp Feature: domain Description: PRK09183 Location: 534-1062 bp Feature: domain Description: PRK09183 Location: 53 4-1062 bp Feature: gene Location: 1321-2214 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1327-1759 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 27-1759 bp Feature: domain Description: GIIM Note: maturase Location: 1819-2050 bp Feature: domain Description: GIIM Note: maturase Location: 1819-2050 bp Feature: gene Location: 2353-3978 bp Feature: domain Description: M20_ArgE_RocB Location: 2389-3940 bp Feature: domain Description: M20_ArgE_RocB Location: 23 89-3 940 bp Feature: gene Location: 4162-4518 bp Feature: domain Description: DUF3139 Location: 4171-4402 bp Feature: domain Description: DUF3 13 9 Location: 4171-4402 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_Tnp_1 (pfam01527), RVT-GII, GIIM (pfam08388), M20_ArgE_RocB (cd05654), DUF3139 (pfam11337), PRK09183 (transposase/IS protein; Provisional)