myRT

myRT report for GCA_002369875.1_ASM236987v1

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Seq: NJPG01000005.1 Klebsiella pneumoniae strain FJ10 NODE_5_length_263692_cov_27.4496, whole genome shotgun sequence (263692 bp)
Overview 1 RT 1: 17458-23720 bp Neighborhood of RT #1 [17458, 23720] STKc_PknB_like RVT-Retrons AAA_15 Feature: gene Location: 17458-18561 bp Feature: domain Description: STKc_PknB_like Location: 17590-18031 bp Feature: domain Description: STKc_PknB_like Location: 1 7590-1 8031 bp Feature: gene Location: 18631-18873 bp Feature: gene Location: 19120-20220 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 19303-19831 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 9303-1 9831 bp Feature: gene Location: 20335-22611 bp Feature: domain Description: AAA_15 Location: 20368-21376 bp Feature: domain Description: AAA_1 5 Location: 20368-21 376 bp Feature: gene Location: 23490-23720 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT STKc_PknB_like (cd14014), RVT-Retrons, AAA_15 (pfam13175)

Seq: NJPG01000051.1 Klebsiella pneumoniae strain FJ10 NODE_51_length_13822_cov_51.8353, whole genome shotgun sequence (13822 bp)
Overview 1 RT 1: 2833-6436 bp Neighborhood of RT #1 [2833, 6561] RVT_N RVT-GII GIIM HNHc DUF1380 Feature: gene Location: 2833-3090 bp Feature: gene Location: 3058-3233 bp Feature: gene Location: 3970-5637 bp Feature: RT Description: RVT_N Location: 4018-4255 bp Feature: RT Description: RVT_N Location: 4018-42 55 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4306-4948 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4306-4948 bp Feature: domain Description: GIIM Note: maturase Location: 4999-5233 bp Feature: domain Description: GIIM Note: maturase Location: 4999-52 33 bp Feature: domain Description: HNHc Note: nucleases Location: 5443-5602 bp Feature: domain Description: HNHc Note: nucleases Location: 5443-5602 bp Feature: gene Location: 5951-6142 bp Feature: gene Location: 6139-6561 bp Feature: domain Description: DUF1380 Location: 6142-6436 bp Feature: domain Description: DUF1380 Location: 6142 -6436 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), DUF1380 (pfam07128)

Seq: NJPG01000076.1 Klebsiella pneumoniae strain FJ10 NODE_76_length_1892_cov_311.603, whole genome shotgun sequence (1892 bp)
Overview 1 RT 1: 59-1794 bp Neighborhood of RT #1 [59, 1794] RVT-GII Feature: gene Location: 59-1543 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 461-1151 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 461-1151 bp Feature: gene Location: 1543-1794 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII