myRT

myRT report for GCA_002369985.1_ASM236998v1

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Seq: NJPK01000107.1 Klebsiella pneumoniae strain 3 hkdn-hvkp-3_S50_R1_001_contig_107, whole genome shotgun sequence (2416 bp)
Overview 1 RT 1: 83-1715 bp Neighborhood of RT #1 [83, 1750] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 83-1750 bp Feature: RT Description: RVT_N Location: 131-368 bp Feature: RT Description: RVT_N Location: 1 31 -368 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 419-1061 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 9-1 061 bp Feature: domain Description: GIIM Note: maturase Location: 1112-1346 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 1 2-1 346 bp Feature: domain Description: HNHc Note: nucleases Location: 1556-1715 bp Feature: domain Description: HNHc Note: nucleases Location: 1 556-1 71 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: NJPK01000088.1 Klebsiella pneumoniae strain 3 hkdn-hvkp-3_S50_R1_001_contig_88, whole genome shotgun sequence (2043 bp)
Overview 1 RT 1: 218-1561 bp Neighborhood of RT #1 [218, 1953] RVT-GII Feature: gene Location: 218-469 bp Feature: gene Location: 469-1953 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 871-1561 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 871-1561 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NJPK01000027.1 Klebsiella pneumoniae strain 3 hkdn-hvkp-3_S50_R1_001_contig_27, whole genome shotgun sequence (246628 bp)
Overview 1 RT 1: 222967-228699 bp Neighborhood of RT #1 [222967, 229229] AAA_15 RVT-Retrons STKc_PknB_like Feature: gene Location: 222967-223197 bp Feature: gene Location: 224076-226352 bp Feature: domain Description: AAA_15 Location: 224109-225117 bp Feature: domain Description: AAA_15 Location: 224109-225117 bp Feature: gene Location: 226467-227567 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 226650-227178 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 226650-227178 bp Feature: gene Location: 227814-228056 bp Feature: gene Location: 228126-229229 bp Feature: domain Description: STKc_PknB_like Location: 228258-228699 bp Feature: domain Description: STKc_PknB_like Location: 228258-228699 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_15 (pfam13175), RVT-Retrons, STKc_PknB_like (cd14014)