myRT

myRT report for GCA_002370005.1_ASM237000v1

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Seq: NJPJ01000138.1 Klebsiella pneumoniae strain 5 hkdn-hvkp-5_S60_R2_001_contig_114, whole genome shotgun sequence (1950 bp)
Overview 1 RT 1: 157-1500 bp Neighborhood of RT #1 [157, 1892] RVT-GII Feature: gene Location: 157-408 bp Feature: gene Location: 408-1892 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 810-1500 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81 0-1 500 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NJPJ01000002.1 Klebsiella pneumoniae strain 5 hkdn-hvkp-5_S60_R2_001_contig_25, whole genome shotgun sequence (230235 bp)
Overview 1 RT 1: 206516-212248 bp Neighborhood of RT #1 [206516, 212778] AAA_15 RVT-Retrons STKc_PknB_like Feature: gene Location: 206516-206746 bp Feature: gene Location: 207625-209901 bp Feature: domain Description: AAA_15 Location: 207658-208666 bp Feature: domain Description: AAA_15 Location: 2 07658-2 08666 bp Feature: gene Location: 210016-211116 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 210199-210727 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 10199-2 1072 7 bp Feature: gene Location: 211363-211605 bp Feature: gene Location: 211675-212778 bp Feature: domain Description: STKc_PknB_like Location: 211807-212248 bp Feature: domain Description: STKc_PknB_like Location: 2 11807-2 12 2 48 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_15 (pfam13175), RVT-Retrons, STKc_PknB_like (cd14014)

Seq: NJPJ01000133.1 Klebsiella pneumoniae strain 5 hkdn-hvkp-5_S60_R2_001_contig_132, whole genome shotgun sequence (2402 bp)
Overview 1 RT 1: 653-2285 bp Neighborhood of RT #1 [653, 2320] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 653-2320 bp Feature: RT Description: RVT_N Location: 701-938 bp Feature: RT Description: RVT_N Location: 701-93 8 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 989-1631 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 989-163 1 bp Feature: domain Description: GIIM Note: maturase Location: 1682-1916 bp Feature: domain Description: GIIM Note: maturase Location: 1682-1916 bp Feature: domain Description: HNHc Note: nucleases Location: 2126-2285 bp Feature: domain Description: HNHc Note: nucleases Location: 2126-2285 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)