myRT

myRT report for GCA_002370065.1_ASM237006v1

Download annotations/find similar RTs

Seq: NJPM01000092.1 Klebsiella pneumoniae strain 1 NODE_92_length_1892_cov_498.717, whole genome shotgun sequence (1892 bp)
Overview 1 RT 1: 59-1794 bp Neighborhood of RT #1 [59, 1794] RVT-GII Feature: gene Location: 59-1543 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 461-1151 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 461 -1 1 51 bp Feature: gene Location: 1543-1794 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NJPM01000009.1 Klebsiella pneumoniae strain 1 NODE_9_length_184693_cov_31.0611, whole genome shotgun sequence (184693 bp)
Overview 1 RT 1: 160974-166706 bp Neighborhood of RT #1 [160974, 167236] AAA_15 RVT-Retrons STKc_PknB_like Feature: gene Location: 160974-161204 bp Feature: gene Location: 162083-164359 bp Feature: domain Description: AAA_15 Location: 162116-163124 bp Feature: domain Description: AAA_15 Location: 162 116-16312 4 bp Feature: gene Location: 164474-165574 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 164657-165185 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 164657-165185 bp Feature: gene Location: 165821-166063 bp Feature: gene Location: 166133-167236 bp Feature: domain Description: STKc_PknB_like Location: 166265-166706 bp Feature: domain Description: STKc_PknB_like Location: 1662 65-166706 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_15 (pfam13175), RVT-Retrons, STKc_PknB_like (cd14014)

Seq: NJPM01000088.1 Klebsiella pneumoniae strain 1 NODE_88_length_2420_cov_83.7674, whole genome shotgun sequence (2420 bp)
Overview 1 RT 1: 671-2303 bp Neighborhood of RT #1 [671, 2338] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 671-2338 bp Feature: RT Description: RVT_N Location: 719-956 bp Feature: RT Description: RVT_N Location: 719-956 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1007-1649 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1007-1649 bp Feature: domain Description: GIIM Note: maturase Location: 1700-1934 bp Feature: domain Description: GIIM Note: maturase Location: 1700-193 4 bp Feature: domain Description: HNHc Note: nucleases Location: 2144-2303 bp Feature: domain Description: HNHc Note: nucleases Location: 2144-23 03 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)