myRT

myRT report for GCA_002371615.1_ASM237161v1

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Seq: DFGA01000010.1 TPA_asm: Lachnospiraceae bacterium UBA3762 UBA3762_contig_61169, whole genome shotgun sequence (23414 bp)
Overview 1 RT 1: 3582-7986 bp Neighborhood of RT #1 [3582, 8090] AbrB pP_pnuc_1 RVT-UG2 Integrase_DNA Phage_int_SAM_3 INT_ICEBs1_C_like Feature: gene Location: 3582-3848 bp Feature: domain Description: AbrB Location: 3597-3780 bp Feature: domain Description: AbrB Location: 3597-3780 bp Feature: gene Location: 3989-4855 bp Feature: domain Description: pP_pnuc_1 Location: 4442-4832 bp Feature: domain Description: pP_pnuc_1 Location: 4442-4832 bp Feature: gene Location: 4965-6257 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 5142-5973 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 51 42-5973 bp Feature: gene Location: 6395-6772 bp Feature: gene Location: 6825-8090 bp Feature: domain Description: Integrase_DNA Location: 6843-7002 bp Feature: domain Description: Integrase_DNA Location: 6843-7002 bp Feature: domain Description: Phage_int_SAM_3 Location: 7041-7206 bp Feature: domain Description: Phage_int_SAM_3 Location: 7041 -7206 bp Feature: domain Description: INT_ICEBs1_C_like Location: 7389-7986 bp Feature: domain Description: INT_ICEBs1 _C_like Location: 7389-7986 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbrB (pfam05145), pP_pnuc_1 (pfam18165), RVT-UG2, Integrase_DNA (pfam02920), Phage_int_SAM_3 (pfam14659), INT_ICEBs1_C_like (cd01189)

Seq: DFGA01000007.1 TPA_asm: Lachnospiraceae bacterium UBA3762 UBA3762_contig_74921, whole genome shotgun sequence (45193 bp)
Overview 1 RT 1: 29235-37083 bp Neighborhood of RT #1 [29235, 37083] NHLM_micro_ABC1 rSAM_fuse_unch RVT-UG26 PIN_limkain_b1_N_like Feature: gene Location: 29235-31370 bp Feature: domain Description: NHLM_micro_ABC1 Location: 29241-31368 bp Feature: domain Description: NHLM_micro_ABC1 Location: 2 92 41-31368 bp Feature: gene Location: 31431-31604 bp Feature: gene Location: 31655-35470 bp Feature: domain Description: rSAM_fuse_unch Location: 31745-33554 bp Feature: domain Description: rSAM_fuse_unch Location: 31745-33554 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 34475-35087 bp Feature: RT Description: RVT-UG2 6 Note: UG2 6 RT Location: 34475-35087 bp Feature: gene Location: 36153-36683 bp Feature: domain Description: PIN_limkain_b1_N_like Location: 36336-36591 bp Feature: domain Description: PIN_limkain_b1_N_like Location: 36336-36591 bp Feature: gene Location: 36760-37083 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NHLM_micro_ABC1 (TIGR03796), rSAM_fuse_unch (TIGR03960), RVT-UG26, PIN_limkain_b1_N_like (cd10910)