myRT

myRT report for GCA_002372195.1_ASM237219v1

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Seq: DFIV01000002.1 TPA_asm: Bacteroidales bacterium UBA3688 UBA3688_contig_10717, whole genome shotgun sequence (55311 bp)
Overview 1 RT 1: 15575-27081 bp Neighborhood of RT #1 [15575, 27104] RVT-Retrons PIF1 PIF1 KOG0987 TPR RVT-AbiP2 WYL Feature: gene Location: 15575-15913 bp Feature: gene Location: 16146-17153 bp Feature: gene Location: 17216-18970 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 17402-18020 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 7402-1 8020 bp Feature: gene Location: 19291-20019 bp Feature: gene Location: 20081-22135 bp Feature: domain Description: PIF1 Location: 20117-20720 bp Feature: domain Description: PIF1 Location: 201 1 7-20720 bp Feature: domain Description: PIF1 Location: 20801-21002 bp Feature: domain Description: PIF1 Location: 20801 -21 002 bp Feature: domain Description: KOG0987 Location: 21137-21218 bp Feature: domain Description: KOG0987 Location: 21 1 37-21 21 8 bp Feature: domain Description: TPR Location: 21446-21761 bp Feature: domain Description: TPR Location: 21 446-21 761 bp Feature: gene Location: 22181-22726 bp Feature: gene Location: 22757-23203 bp Feature: gene Location: 23489-25042 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 23915-24374 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2391 5-24374 bp Feature: gene Location: 25078-25809 bp Feature: gene Location: 26025-27104 bp Feature: domain Description: WYL Location: 26541-27081 bp Feature: domain Description: WYL Location: 26541 -27081 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, PIF1 (pfam05970), KOG0987 (KOG0987, DNA helicase PIF1/RRM3 ), TPR (smart00028), RVT-AbiP2, WYL (pfam13280)

Seq: DFIV01000024.1 TPA_asm: Bacteroidales bacterium UBA3688 UBA3688_contig_383, whole genome shotgun sequence (311231 bp)
Overview 1 RT 1: 220933-228521 bp Neighborhood of RT #1 [220933, 228523] DUF481 RVT-UG27 Propeptide_C25 Peptidase_C25 Por_Secre_tail Feature: gene Location: 220933-221673 bp Feature: domain Description: DUF481 Location: 221035-221662 bp Feature: domain Description: DUF481 Location: 2 2 1035-2 2 1662 bp Feature: gene Location: 221820-222641 bp Feature: gene Location: 222701-224362 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 222896-223541 bp Feature: RT Description: RVT-UG2 7 Note: UG2 7 RT Location: 2 2 2 896-2 2 3541 bp Feature: gene Location: 224519-225541 bp Feature: gene Location: 225833-228523 bp Feature: domain Description: Propeptide_C25 Location: 225944-226487 bp Feature: domain Description: Propeptide_C2 5 Location: 2 2 5944-2 2 6487 bp Feature: domain Description: Peptidase_C25 Location: 226556-227714 bp Feature: domain Description: Peptidase_C2 5 Location: 2 2 6556-2 2 7714 bp Feature: domain Description: Por_Secre_tail Location: 228314-228521 bp Feature: domain Description: Por_Secre_tail Location: 2 2 8314-2 2 852 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF481 (pfam04338), RVT-UG27, Propeptide_C25 (pfam08126), Peptidase_C25 (pfam01364), Por_Secre_tail (TIGR04183)