myRT

myRT report for GCA_002372455.1_ASM237245v1

Download annotations/find similar RTs

Seq: DFGV01000218.1 TPA_asm: Kandleria sp. UBA3741 UBA3741_contig_235078, whole genome shotgun sequence (15770 bp)
Overview 1 RT 1: 1-8508 bp Neighborhood of RT #1 [1, 8522] ManZ DUF956 RVT-GII INT_RitA_C_like INT_RitB_C_like Phage_int_SAM_5 INT_RitC_C_like RVT-GII GIIM aMBF1 LexA Feature: gene Location: 1-930 bp Feature: domain Description: ManZ Location: 22-928 bp Feature: domain Description: ManZ Location: 22-928 bp Feature: gene Location: 948-1319 bp Feature: domain Description: DUF956 Location: 951-1293 bp Feature: domain Description: DUF956 Location: 951 -1 293 bp Feature: gene Location: 1941-2627 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2142-2613 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 42-261 3 bp Feature: gene Location: 2751-3953 bp Feature: domain Description: INT_RitA_C_like Location: 3411-3924 bp Feature: domain Description: INT_RitA_C_like Location: 341 1 -3924 bp Feature: gene Location: 3959-4915 bp Feature: domain Description: INT_RitB_C_like Location: 4283-4850 bp Feature: domain Description: INT_RitB_C_like Location: 4283-4850 bp Feature: gene Location: 5055-5927 bp Feature: domain Description: Phage_int_SAM_5 Location: 5073-5226 bp Feature: domain Description: Phage_int_SAM_5 Location: 5073-5226 bp Feature: domain Description: INT_RitC_C_like Location: 5301-5859 bp Feature: domain Description: INT_RitC_C_like Location: 5301 -5859 bp Feature: gene Location: 6091-6684 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6094-6196 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6094-61 96 bp Feature: domain Description: GIIM Note: maturase Location: 6250-6466 bp Feature: domain Description: GIIM Note: maturase Location: 6250-6466 bp Feature: gene Location: 6851-7813 bp Feature: domain Description: aMBF1 Location: 6872-7019 bp Feature: domain Description: aMBF1 Location: 6872-701 9 bp Feature: gene Location: 7911-8522 bp Feature: domain Description: LexA Location: 7962-8508 bp Feature: domain Description: LexA Location: 7962-8508 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ManZ (COG3716), RVT-GII, INT_RitA_C_like (cd01188), INT_RitB_C_like (cd00797), DUF956 (pfam06115), Phage_int_SAM_5 (pfam13102), INT_RitC_C_like (cd01182), GIIM (pfam08388), aMBF1 (COG1813), LexA (COG1974)

Seq: DFGV01000155.1 TPA_asm: Kandleria sp. UBA3741 UBA3741_contig_353464, whole genome shotgun sequence (3887 bp)
Overview 1 RT 1: 3-3050 bp Neighborhood of RT #1 [3, 3058] RVT-GII DUF349 DUF349 DUF349 DUF349 DUF349 Feature: gene Location: 3-1214 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 231-855 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 31-855 bp Feature: gene Location: 1202-1582 bp Feature: gene Location: 1892-3058 bp Feature: domain Description: DUF349 Location: 2159-2282 bp Feature: domain Description: DUF349 Location: 2 159-2 2 82 bp Feature: domain Description: DUF349 Location: 2315-2495 bp Feature: domain Description: DUF349 Location: 2 315-2 495 bp Feature: domain Description: DUF349 Location: 2516-2732 bp Feature: domain Description: DUF349 Location: 2 516-2 732 bp Feature: domain Description: DUF349 Location: 2753-2969 bp Feature: domain Description: DUF349 Location: 2 753-2 969 bp Feature: domain Description: DUF349 Location: 2990-3050 bp Feature: domain Description: DUF349 Location: 2 990-3050 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF349 (pfam03993), RVT-GII