myRT

myRT report for GCA_002372655.1_ASM237265v1

Download annotations/find similar RTs

Seq: DFHO01000018.1 TPA_asm: Fibrobacter sp. UBA3721 UBA3721_contig_19881, whole genome shotgun sequence (76512 bp)
Overview 1 RT 1: 64104-72764 bp Neighborhood of RT #1 [64104, 72775] COG2865 putAbiC RVT-UG5 nitrilase RMtype1_S_SonII-TRD2-CR2_like RMtype1_S_EcoKI_StySPI-TRD2-CR2_like HsdM Feature: gene Location: 64104-65534 bp Feature: domain Description: COG2865 Location: 64113-65523 bp Feature: domain Description: COG2865 Location: 641 1 3-65523 bp Feature: gene Location: 65638-66747 bp Feature: domain Description: putAbiC Location: 66394-66646 bp Feature: domain Description: putAbiC Location: 66394-66646 bp Feature: gene Location: 66759-69764 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 67257-67728 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 67257-67728 bp Feature: domain Description: nitrilase Location: 69042-69627 bp Feature: domain Description: nitrilase Location: 69042-69627 bp Feature: gene Location: 69780-71027 bp Feature: domain Description: RMtype1_S_SonII-TRD2-CR2_like Location: 69795-70350 bp Feature: domain Description: RMtype1 _S_SonII-TRD2-CR2_like Location: 69795-70350 bp Feature: domain Description: RMtype1_S_EcoKI_StySPI-TRD2-CR2_like Location: 70422-70992 bp Feature: domain Description: RMtype1 _S_EcoKI_StySPI-TRD2-CR2_like Location: 70422-70992 bp Feature: gene Location: 71123-72775 bp Feature: domain Description: HsdM Location: 71171-72764 bp Feature: domain Description: HsdM Location: 71 1 71 -72764 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG2865 (Predicted transcriptional regulator, contains HTH domain ), putAbiC (pfam16872), RVT-UG5, nitrilase (cl11424), RMtype1_S_SonII-TRD2-CR2_like (cd17246), RMtype1_S_EcoKI_StySPI-TRD2-CR2_like (cd17517), HsdM (COG0286)

Seq: DFHO01000012.1 TPA_asm: Fibrobacter sp. UBA3721 UBA3721_contig_2040, whole genome shotgun sequence (55450 bp)
Overview 1 RT 1: 21515-29619 bp Neighborhood of RT #1 [21515, 30074] LemA NERD AE_Prim_S_like RVT-UG10 AAA_13 AAA_13 Feature: gene Location: 21515-22120 bp Feature: domain Description: LemA Location: 21527-22103 bp Feature: domain Description: LemA Location: 2 152 7-2 2 103 bp Feature: gene Location: 22349-23143 bp Feature: domain Description: NERD Location: 22619-22922 bp Feature: domain Description: NERD Location: 2 2 619-2 2 92 2 bp Feature: gene Location: 23226-25736 bp Feature: domain Description: AE_Prim_S_like Location: 23313-23592 bp Feature: domain Description: AE_Prim_S_like Location: 2 3313-2 3592 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 24558-25194 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 2 4558-2 5194 bp Feature: gene Location: 25729-28476 bp Feature: gene Location: 28602-30074 bp Feature: domain Description: AAA_13 Location: 28680-29208 bp Feature: domain Description: AAA_13 Location: 2 8680-2 92 08 bp Feature: domain Description: AAA_13 Location: 29376-29619 bp Feature: domain Description: AAA_13 Location: 2 9376-2 9619 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LemA (pfam04011), NERD (pfam08378), AE_Prim_S_like (cl01287), RVT-UG10, AAA_13 (pfam13166)