myRT

myRT report for GCA_002373675.1_ASM237367v1

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Seq: DFLF01000006.1 TPA_asm: Pseudobutyrivibrio sp. UBA3626 UBA3626_contig_4448, whole genome shotgun sequence (45422 bp)
Overview 1 RT 1: 9459-13800 bp Neighborhood of RT #1 [9459, 13811] GT4_PimA-like GT4_PimA-like DDE_Tnp_ISL3 RVT-GII GIIM OCH1 WbbJ Feature: gene Location: 9459-10547 bp Feature: domain Description: GT4_PimA-like Location: 9513-10197 bp Feature: domain Description: GT4_PimA-like Location: 951 3-1 01 97 bp Feature: domain Description: GT4_PimA-like Location: 10293-10527 bp Feature: domain Description: GT4_PimA-like Location: 1 0293-1 0527 bp Feature: gene Location: 10564-11460 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 10588-11365 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 1 0588-1 1 365 bp Feature: gene Location: 11559-12830 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11751-12366 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 751 -1 2366 bp Feature: domain Description: GIIM Note: maturase Location: 12426-12657 bp Feature: domain Description: GIIM Note: maturase Location: 1 2426-1 2657 bp Feature: gene Location: 13344-13523 bp Feature: domain Description: OCH1 Location: 13347-13464 bp Feature: domain Description: OCH1 Location: 1 3347-1 3464 bp Feature: gene Location: 13554-13811 bp Feature: domain Description: WbbJ Location: 13557-13800 bp Feature: domain Description: WbbJ Location: 1 3557-1 3800 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_ISL3 (pfam01610), RVT-GII, GIIM (pfam08388), OCH1 (COG3774), WbbJ (COG0110), GT4_PimA-like (cd03801)