myRT

myRT report for GCA_002375855.1_ASM237585v1

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Seq: DFNB01000029.1 TPA_asm: Clostridiales bacterium UBA3578 UBA3578_contig_788, whole genome shotgun sequence (5278 bp)
Overview 1 RT 1: 528-3255 bp Neighborhood of RT #1 [528, 3272] RVT-GII Imm50 Feature: gene Location: 528-911 bp Feature: gene Location: 912-1694 bp Feature: gene Location: 1750-2169 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1840-2107 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 840-21 07 bp Feature: gene Location: 2230-2412 bp Feature: gene Location: 2889-3272 bp Feature: domain Description: Imm50 Location: 2913-3255 bp Feature: domain Description: Imm50 Location: 291 3-3255 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Imm50 (pfam15594)

Seq: DFNB01000065.1 TPA_asm: Clostridiales bacterium UBA3578 UBA3578_contig_98, whole genome shotgun sequence (95925 bp)
Overview 1 RT 1: 54348-61421 bp Neighborhood of RT #1 [54348, 61421] COG5340 nitrilase group_II_RT_mat RVT-UG6 dnaG Feature: gene Location: 54348-55106 bp Feature: domain Description: COG5340 Location: 54384-55056 bp Feature: domain Description: COG5340 Location: 54384-55056 bp Feature: gene Location: 55379-56287 bp Feature: domain Description: nitrilase Location: 55577-56147 bp Feature: domain Description: nitrilase Location: 55577-56147 bp Feature: gene Location: 56274-59615 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 56310-56628 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 56310-5662 8 bp Feature: RT Description: RVT-UG6 Note: UG6 RT Location: 56943-57381 bp Feature: RT Description: RVT-UG6 Note: UG6 RT Location: 56943-57381 bp Feature: gene Location: 59618-60646 bp Feature: domain Description: dnaG Location: 59717-60626 bp Feature: domain Description: dnaG Location: 59717-6062 6 bp Feature: gene Location: 61092-61421 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5340 (Transcriptional regulator, predicted component of viral defense system ), nitrilase (cl11424), group_II_RT_mat (TIGR04416), RVT-UG6, dnaG (TIGR01391)