myRT

myRT report for GCA_002379095.1_ASM237909v1

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Seq: NBZV01000018.1 Polaromonas sp. AER18D-145 scaffold_17, whole genome shotgun sequence (79349 bp)
Overview 1 RT 1: 53209-58272 bp Neighborhood of RT #1 [53209, 58379] CaiB CaiD RVT-GII AHL_lactonase_MBL-fold Feature: gene Location: 53209-54414 bp Feature: domain Description: CaiB Location: 53212-54385 bp Feature: domain Description: CaiB Location: 5321 2-54385 bp Feature: gene Location: 54429-55217 bp Feature: domain Description: CaiD Location: 54444-55200 bp Feature: domain Description: CaiD Location: 54444-55200 bp Feature: gene Location: 55492-57270 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56206-56896 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56206-56896 bp Feature: gene Location: 57339-57515 bp Feature: gene Location: 57558-58379 bp Feature: domain Description: AHL_lactonase_MBL-fold Location: 57576-58272 bp Feature: domain Description: AHL_lactonase_MBL-fold Location: 57576-58272 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CaiB (COG1804), CaiD (COG1024), RVT-GII, AHL_lactonase_MBL-fold (cd07729)

Seq: NBZV01000023.1 Polaromonas sp. AER18D-145 scaffold_22, whole genome shotgun sequence (70086 bp)
Overview 1 RT 1: 9367-18366 bp Neighborhood of RT #1 [9367, 21659] HNH_2 RVT-UG1 HsdM Feature: gene Location: 9367-9897 bp Feature: gene Location: 9923-10657 bp Feature: domain Description: HNH_2 Location: 10337-10493 bp Feature: domain Description: HNH_2 Location: 10337-10493 bp Feature: gene Location: 10724-14548 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 11345-11882 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 11345-11882 bp Feature: gene Location: 14568-16565 bp Feature: gene Location: 16575-21659 bp Feature: domain Description: HsdM Location: 17901-18366 bp Feature: domain Description: HsdM Location: 17901-18366 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HNH_2 (pfam13391), RVT-UG1, HsdM (COG0286)