myRT

myRT report for GCA_002381465.1_ASM238146v1

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Seq: DFTM01000009.1 TPA_asm: Arsukibacterium sp. UBA4212 UBA4212_contig_336, whole genome shotgun sequence (550619 bp)
Overview 1 RT 1: 38833-43299 bp Neighborhood of RT #1 [38833, 43544] COG4994 RVT-Retrons AAA_15 AAA_15 TOPRIM_OLD Feature: gene Location: 38833-39051 bp Feature: gene Location: 39071-39442 bp Feature: domain Description: COG4994 Location: 39083-39425 bp Feature: domain Description: COG4994 Location: 39083-39425 bp Feature: gene Location: 39625-40557 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 39724-40309 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 39724-40309 bp Feature: gene Location: 40547-41479 bp Feature: gene Location: 41898-43544 bp Feature: domain Description: AAA_15 Location: 41901-42039 bp Feature: domain Description: AAA_1 5 Location: 41 901 -42039 bp Feature: domain Description: AAA_15 Location: 42372-42903 bp Feature: domain Description: AAA_1 5 Location: 42372-42903 bp Feature: domain Description: TOPRIM_OLD Location: 43056-43299 bp Feature: domain Description: TOPRIM_OLD Location: 43056-43299 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4994 (Uncharacterized protein ), RVT-Retrons, AAA_15 (pfam13175), TOPRIM_OLD (cd01026)

Seq: DFTM01000005.1 TPA_asm: Arsukibacterium sp. UBA4212 UBA4212_contig_957, whole genome shotgun sequence (321471 bp)
Overview 1 RT 1: 311031-316697 bp Neighborhood of RT #1 [311031, 316717] DUF1566 DUF1566 RVT-UG12 RMtype1_S_SonII-TRD2-CR2_like HsdS RMtype1_S_SonII-TRD2-CR2_like Feature: gene Location: 311031-311345 bp Feature: gene Location: 311642-312544 bp Feature: domain Description: DUF1566 Location: 311657-311906 bp Feature: domain Description: DUF1566 Location: 311657-311906 bp Feature: domain Description: DUF1566 Location: 311984-312320 bp Feature: domain Description: DUF1566 Location: 311984-312 32 0 bp Feature: gene Location: 312681-314270 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 313077-313497 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 313077-313497 bp Feature: gene Location: 314277-314972 bp Feature: gene Location: 314969-316717 bp Feature: domain Description: RMtype1_S_SonII-TRD2-CR2_like Location: 315290-315836 bp Feature: domain Description: RMtype1_S_SonII-TRD2 -CR2 _like Location: 3152 90-315836 bp Feature: domain Description: HsdS Location: 315872-316094 bp Feature: domain Description: HsdS Location: 315872 -316094 bp Feature: domain Description: RMtype1_S_SonII-TRD2-CR2_like Location: 316139-316697 bp Feature: domain Description: RMtype1_S_SonII-TRD2 -CR2 _like Location: 316139-316697 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1566 (pfam07603), RVT-UG12, RMtype1_S_SonII-TRD2-CR2_like (cd17246), HsdS (COG0732)