myRT

myRT report for GCA_002381605.1_ASM238160v1

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Seq: DFXB01000078.1 TPA_asm: Mucilaginibacter sp. UBA4119 UBA4119_contig_2187, whole genome shotgun sequence (30744 bp)
Overview 1 RT 1: 27572-30614 bp Neighborhood of RT #1 [27572, 30712] DUF1835 RVT-GII GIIM Feature: gene Location: 27572-28360 bp Feature: domain Description: DUF1835 Location: 27587-27896 bp Feature: domain Description: DUF1 835 Location: 27587-27896 bp Feature: gene Location: 28492-28908 bp Feature: gene Location: 29465-30712 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29675-30335 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29675-30335 bp Feature: domain Description: GIIM Note: maturase Location: 30437-30614 bp Feature: domain Description: GIIM Note: maturase Location: 30437-3061 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1835 (pfam08874), RVT-GII, GIIM (pfam08388)

Seq: DFXB01000060.1 TPA_asm: Mucilaginibacter sp. UBA4119 UBA4119_contig_2934, whole genome shotgun sequence (12003 bp)
Overview 1 RT 1: 6097-12001 bp Neighborhood of RT #1 [6097, 12001] AAA MarR TPR SLR SLR RVT_N RVT-GII GIIM McrA Feature: gene Location: 6097-6225 bp Feature: gene Location: 6364-9123 bp Feature: domain Description: AAA Location: 6481-6910 bp Feature: domain Description: AAA Location: 6481-6910 bp Feature: domain Description: MarR Location: 7192-7402 bp Feature: domain Description: MarR Location: 7192 -7402 bp Feature: domain Description: TPR Location: 7744-7816 bp Feature: domain Description: TPR Location: 7744-7816 bp Feature: domain Description: SLR Location: 7876-8245 bp Feature: domain Description: SLR Location: 7876-82 45 bp Feature: domain Description: SLR Location: 8278-8626 bp Feature: domain Description: SLR Location: 82 78-862 6 bp Feature: gene Location: 9515-11191 bp Feature: RT Description: RVT_N Location: 9548-9788 bp Feature: RT Description: RVT_N Location: 9548-9788 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9836-10481 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9836-10481 bp Feature: domain Description: GIIM Note: maturase Location: 10598-10817 bp Feature: domain Description: GIIM Note: maturase Location: 10598-10817 bp Feature: domain Description: McrA Location: 10865-11168 bp Feature: domain Description: McrA Location: 10865-11168 bp Feature: gene Location: 11448-11696 bp Feature: gene Location: 11771-12001 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA (TIGR00769), MarR (pfam01047), TPR (smart00028), SLR (sd00010), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: DFXB01000082.1 TPA_asm: Mucilaginibacter sp. UBA4119 UBA4119_contig_37, whole genome shotgun sequence (90646 bp)
Overview 1 RT 1: 7987-14095 bp Neighborhood of RT #1 [7987, 14172] SMC_N DUF262 DUF1524 RVT-GII GIIM INTN1_C_like Feature: gene Location: 7987-9834 bp Feature: domain Description: SMC_N Location: 7999-9013 bp Feature: domain Description: SMC_N Location: 7999-9013 bp Feature: gene Location: 9906-11759 bp Feature: domain Description: DUF262 Location: 9957-10608 bp Feature: domain Description: DUF262 Location: 9957-10608 bp Feature: domain Description: DUF1524 Location: 11352-11583 bp Feature: domain Description: DUF1524 Location: 113 52-11583 bp Feature: gene Location: 11966-13234 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12164-12782 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12164-12782 bp Feature: domain Description: GIIM Note: maturase Location: 12836-13064 bp Feature: domain Description: GIIM Note: maturase Location: 1283 6-13 064 bp Feature: gene Location: 13415-13651 bp Feature: gene Location: 13912-14172 bp Feature: domain Description: INTN1_C_like Location: 13939-14095 bp Feature: domain Description: INTN1_C_like Location: 13 93 9-14095 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), INTN1_C_like (cd01185), SMC_N (pfam02463), DUF262 (pfam03235), DUF1524 (pfam07510)

Seq: DFXB01000084.1 TPA_asm: Mucilaginibacter sp. UBA4119 UBA4119_contig_8898, whole genome shotgun sequence (3556 bp)
Overview 1 RT 1: 2-3548 bp Neighborhood of RT #1 [2, 3553] Rhs_assc_core RVT-GII Fib_succ_major PulF Feature: gene Location: 2-844 bp Feature: domain Description: Rhs_assc_core Location: 11-149 bp Feature: domain Description: Rhs_assc_core Location: 11-14 9 bp Feature: gene Location: 998-1483 bp Feature: gene Location: 2046-2336 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2256-2316 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2256-2316 bp Feature: gene Location: 2541-3176 bp Feature: domain Description: Fib_succ_major Location: 2646-3171 bp Feature: domain Description: Fib_succ_major Location: 264 6-3171 bp Feature: gene Location: 3185-3553 bp Feature: domain Description: PulF Location: 3194-3548 bp Feature: domain Description: PulF Location: 3194 -354 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Fib_succ_major (TIGR02145), Rhs_assc_core (TIGR03696)