myRT

myRT report for GCA_002381615.1_ASM238161v1

Download annotations/find similar RTs

Seq: DFWY01000078.1 TPA_asm: Polaromonas sp. UBA4122 UBA4122_contig_1308, whole genome shotgun sequence (87744 bp)
Overview 1 RT 1: 2-1068 bp Neighborhood of RT #1 [2, 1068] RVT-GII Feature: gene Location: 2-376 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-365 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-365 bp Feature: gene Location: 568-849 bp Feature: gene Location: 898-1068 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: DFWY01000060.1 TPA_asm: Polaromonas sp. UBA4122 UBA4122_contig_1406, whole genome shotgun sequence (50381 bp)
Overview 1 RT 1: 43806-49843 bp Neighborhood of RT #1 [43806, 50001] PRK14016 cya_phycin_syn RVT-GII GIIM Feature: gene Location: 43806-46040 bp Feature: domain Description: PRK14016 Location: 43827-46020 bp Feature: domain Description: PRK14016 Location: 4382 7-4602 0 bp Feature: gene Location: 46040-48691 bp Feature: domain Description: cya_phycin_syn Location: 46046-48593 bp Feature: domain Description: cya_phycin_syn Location: 46046-48593 bp Feature: gene Location: 48694-50001 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48967-49579 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48967-49579 bp Feature: domain Description: GIIM Note: maturase Location: 49636-49843 bp Feature: domain Description: GIIM Note: maturase Location: 49636-49843 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK14016 (cyanophycin synthetase; Provisional), cya_phycin_syn (TIGR02068), RVT-GII, GIIM (pfam08388)

Seq: DFWY01000106.1 TPA_asm: Polaromonas sp. UBA4122 UBA4122_contig_3806, whole genome shotgun sequence (6344 bp)
Overview 1 RT 1: 4240-6267 bp Neighborhood of RT #1 [4240, 6341] Ion_trans_2 TrkA_N Rve RVT-GII GIIM Feature: gene Location: 4240-5202 bp Feature: domain Description: Ion_trans_2 Location: 4249-4468 bp Feature: domain Description: Ion_trans_2 Location: 4249-4468 bp Feature: domain Description: TrkA_N Location: 4543-4894 bp Feature: domain Description: TrkA_N Location: 4543 -4894 bp Feature: gene Location: 5288-6004 bp Feature: domain Description: Rve Location: 5561-5942 bp Feature: domain Description: Rve Location: 5561-5942 bp Feature: gene Location: 5820-6341 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5823-5967 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5823 -5967 bp Feature: domain Description: GIIM Note: maturase Location: 6045-6267 bp Feature: domain Description: GIIM Note: maturase Location: 6045-6267 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Ion_trans_2 (pfam07885), TrkA_N (pfam02254), Rve (COG3316), RVT-GII, GIIM (pfam08388)