myRT

myRT report for GCA_002383425.1_ASM238342v1

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Seq: DFYV01000150.1 TPA_asm: Bacteroidales bacterium UBA4073 UBA4073_contig_2150, whole genome shotgun sequence (29815 bp)
Overview 1 RT 1: 3-4133 bp Neighborhood of RT #1 [3, 4165] Chrome_Resist RVT-UG14 23S_rRNA_IVP_like clpX Feature: gene Location: 3-218 bp Feature: domain Description: Chrome_Resist Location: 12-219 bp Feature: domain Description: Chrome_Resist Location: 1 2-21 9 bp Feature: gene Location: 217-351 bp Feature: gene Location: 401-1933 bp Feature: RT Description: RVT-UG14 Note: UG14 RT Location: 806-1277 bp Feature: RT Description: RVT-UG1 4 Note: UG1 4 RT Location: 806-1 277 bp Feature: gene Location: 2476-2670 bp Feature: domain Description: 23S_rRNA_IVP_like Location: 2482-2659 bp Feature: domain Description: 23S_rRNA_IVP_like Location: 2482-2659 bp Feature: gene Location: 2942-4165 bp Feature: domain Description: clpX Location: 2948-4133 bp Feature: domain Description: clpX Location: 2948-41 33 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Chrome_Resist (pfam09828), RVT-UG14, 23S_rRNA_IVP_like (cd16377), clpX

Seq: DFYV01000126.1 TPA_asm: Bacteroidales bacterium UBA4073 UBA4073_contig_34396, whole genome shotgun sequence (10270 bp)
Overview 1 RT 1: 477-4034 bp Neighborhood of RT #1 [477, 4034] RVT-GII GIIM Peptidase_C1 Feature: gene Location: 477-632 bp Feature: gene Location: 691-1986 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 955-1621 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 955-162 1 bp Feature: domain Description: GIIM Note: maturase Location: 1699-1903 bp Feature: domain Description: GIIM Note: maturase Location: 1699-1903 bp Feature: gene Location: 2298-3446 bp Feature: domain Description: Peptidase_C1 Location: 2400-3393 bp Feature: domain Description: Peptidase_C1 Location: 2 400-3393 bp Feature: gene Location: 3792-4034 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Peptidase_C1 (pfam00112)