myRT

myRT report for GCA_002383435.1_ASM238343v1

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Seq: DFYX01000071.1 TPA_asm: Paludibacter sp. UBA4071 UBA4071_contig_13185, whole genome shotgun sequence (6467 bp)
Overview 1 RT 1: 279-6288 bp Neighborhood of RT #1 [279, 6464] group_II_RT_mat RVT-UNC N6_Mtase N6_Mtase TaqI_C Feature: gene Location: 279-1052 bp Feature: gene Location: 1324-3204 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1435-1675 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1 435-1 675 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1753-2236 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1 753-2236 bp Feature: gene Location: 3310-4194 bp Feature: gene Location: 4329-6464 bp Feature: domain Description: N6_Mtase Location: 4755-5016 bp Feature: domain Description: N6_Mtase Location: 4755-501 6 bp Feature: domain Description: N6_Mtase Location: 5304-5730 bp Feature: domain Description: N6_Mtase Location: 5304-5730 bp Feature: domain Description: TaqI_C Location: 5937-6288 bp Feature: domain Description: TaqI_C Location: 5937-6288 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT group_II_RT_mat (TIGR04416), RVT-UG9/RVT-UG19/RVT-UG23(RVT-UNC), N6_Mtase (pfam02384), TaqI_C (pfam12950)

Seq: DFYX01000258.1 TPA_asm: Paludibacter sp. UBA4071 UBA4071_contig_20080, whole genome shotgun sequence (7066 bp)
Overview 1 RT 1: 832-2883 bp Neighborhood of RT #1 [832, 2883] RVT-GII GIIM Feature: gene Location: 832-1641 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1045-1621 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1045-162 1 bp Feature: gene Location: 1742-2080 bp Feature: domain Description: GIIM Note: maturase Location: 1781-1994 bp Feature: domain Description: GIIM Note: maturase Location: 1781-1994 bp Feature: gene Location: 2179-2883 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: DFYX01000025.1 TPA_asm: Paludibacter sp. UBA4071 UBA4071_contig_32449, whole genome shotgun sequence (47291 bp)
Overview 1 RT 1: 330-1876 bp Neighborhood of RT #1 [330, 1876] RVT-DGRs Feature: gene Location: 330-1322 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 540-1128 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 540-1128 bp Feature: gene Location: 1339-1521 bp Feature: gene Location: 1550-1876 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs