myRT

myRT report for GCA_002386065.1_ASM238606v1

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Seq: DGES01000077.1 TPA_asm: Firmicutes bacterium UBA3920 UBA3920_contig_1978, whole genome shotgun sequence (4656 bp)
Overview 1 RT 1: 1-4171 bp Neighborhood of RT #1 [1, 4653] HsdM RMtype1_S_TRD-CR_like RVT-GII GIIM DUF3106 DUF3106 Feature: gene Location: 1-948 bp Feature: domain Description: HsdM Location: 25-880 bp Feature: domain Description: HsdM Location: 25-880 bp Feature: gene Location: 917-1540 bp Feature: domain Description: RMtype1_S_TRD-CR_like Location: 923-1466 bp Feature: domain Description: RMtype1 _S_TRD-CR_like Location: 923-1 466 bp Feature: gene Location: 1919-3343 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2282-2897 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2282-2897 bp Feature: domain Description: GIIM Note: maturase Location: 2954-3182 bp Feature: domain Description: GIIM Note: maturase Location: 2954-31 82 bp Feature: gene Location: 3808-4653 bp Feature: domain Description: DUF3106 Location: 3928-4003 bp Feature: domain Description: DUF31 06 Location: 3928-4003 bp Feature: domain Description: DUF3106 Location: 4090-4171 bp Feature: domain Description: DUF31 06 Location: 4090-41 71 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HsdM (COG0286), RMtype1_S_TRD-CR_like (cl38903)

Seq: DGES01000022.1 TPA_asm: Firmicutes bacterium UBA3920 UBA3920_contig_7282, whole genome shotgun sequence (3250 bp)
Overview 1 RT 1: 475-3248 bp Neighborhood of RT #1 [475, 3248] RVT-DGRs Feature: gene Location: 475-1554 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 688-1297 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 688-12 97 bp Feature: gene Location: 2476-2691 bp Feature: gene Location: 3120-3248 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs