myRT

myRT report for GCA_002386225.2_ASM238622v2

Download annotations/find similar RTs

Seq: CP023502.1 Klebsiella pneumoniae strain FDAARGOS_445 chromosome, complete genome (5402136 bp)
Overview 1 RT 1: 2941657-2945140 bp 2 RT 2: 3278511-3282619 bp 3 RT 3: 3412156-3416292 bp 4 RT 4: 3493469-3495976 bp 5 RT 5: 4699637-4705215 bp 6 RT 6: 4734740-4739621 bp Neighborhood of RT #1 [2941657, 2945145] int RVT-GII DinI Neighborhood of RT #2 [3278511, 3282621] DinI RVT-GII PRK10276 umuC Neighborhood of RT #3 [3412156, 3416294] RVT-GII PRK10276 umuC Neighborhood of RT #4 [3493469, 3495976] RVT-GII Neighborhood of RT #5 [4699637, 4705391] AAA_15 RVT-Retrons Nuc_deoxyrib_tr Neighborhood of RT #6 [4734740, 4739626] YccC PRK10016 RVT-GII dacD Feature: gene Location: 2941657-2942709 bp Ori: ATF45007.1 Feature: domain Description: int Location: 2941660-2942659 bp Feature: domain Description: int Location: 2941 660-2942659 bp Feature: gene Location: 2942877-2943128 bp Feature: gene Location: 2943128-2944612 bp Ori: ATF45009.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2943530-2944220 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2943530-2944220 bp Feature: gene Location: 2944713-2944901 bp Feature: gene Location: 2944840-2945145 bp Ori: ATF45011.1 Feature: domain Description: DinI Location: 2944954-2945140 bp Feature: domain Description: DinI Location: 2944954-29451 40 bp Feature: gene Location: 3278511-3278753 bp Ori: ATF45319.1 Feature: domain Description: DinI Location: 3278562-3278742 bp Feature: domain Description: DinI Location: 3278562-3278742 bp Feature: gene Location: 3279120-3279371 bp Feature: gene Location: 3279371-3280855 bp Ori: ATF45321.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3279773-3280463 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3279773-3280463 bp Feature: gene Location: 3280934-3281353 bp Ori: ATF45322.1 Feature: domain Description: PRK10276 Location: 3280937-3281348 bp Feature: domain Description: PRK1 0276 Location: 3280937-3281 348 bp Feature: gene Location: 3281356-3282621 bp Ori: ATF45323.1 Feature: domain Description: umuC Location: 3281359-3282619 bp Feature: domain Description: umuC Location: 3281 359-328261 9 bp Feature: gene Location: 3412156-3412245 bp Feature: gene Location: 3412793-3413044 bp Feature: gene Location: 3413044-3414528 bp Ori: ATF45447.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3413446-3414136 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 341 3446-341 41 36 bp Feature: gene Location: 3414608-3415027 bp Ori: ATF45448.1 Feature: domain Description: PRK10276 Location: 3414611-3415022 bp Feature: domain Description: PRK1 0276 Location: 341 461 1 -341 5022 bp Feature: gene Location: 3415029-3416294 bp Ori: ATF45449.1 Feature: domain Description: umuC Location: 3415032-3416292 bp Feature: domain Description: umuC Location: 341 5032-341 6292 bp Feature: gene Location: 3493469-3493678 bp Feature: gene Location: 3493880-3494131 bp Feature: gene Location: 3494131-3495614 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3494533-3494659 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3494533-3494659 bp Feature: gene Location: 3495607-3495678 bp Feature: gene Location: 3495692-3495976 bp Feature: gene Location: 4699637-4699867 bp Feature: gene Location: 4700750-4703026 bp Ori: ATF46662.1 Feature: domain Description: AAA_15 Location: 4700783-4701791 bp Feature: domain Description: AAA_1 5 Location: 4700783-4701 791 bp Feature: gene Location: 4703141-4704241 bp Ori: ATF46663.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4703324-4703852 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4703324-4703852 bp Feature: gene Location: 4704722-4704877 bp Feature: gene Location: 4704897-4705391 bp Ori: ATF47477.1 Feature: domain Description: Nuc_deoxyrib_tr Location: 4705041-4705215 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 4705041 -470521 5 bp Feature: gene Location: 4734740-4735798 bp Ori: ATF46695.1 Feature: domain Description: YccC Location: 4734746-4735784 bp Feature: domain Description: YccC Location: 4734746-4735784 bp Feature: gene Location: 4735897-4736370 bp Ori: ATF46696.1 Feature: domain Description: PRK10016 Location: 4735900-4736359 bp Feature: domain Description: PRK1 001 6 Location: 4735900-4736359 bp Feature: gene Location: 4736452-4737936 bp Ori: ATF46698.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4736854-4737544 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4736854-4737544 bp Feature: gene Location: 4737936-4738187 bp Feature: gene Location: 4738457-4739626 bp Ori: ATF46700.1 Feature: domain Description: dacD Location: 4738466-4739621 bp Feature: domain Description: dacD Location: 4738466-4739621 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT int (PHA02601), RVT-GII, DinI (pfam06183), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), AAA_15 (pfam13175), RVT-Retrons, Nuc_deoxyrib_tr (pfam05014), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC)
dacD (PRK11397)