myRT

myRT report for GCA_002386525.1_ASM238652v1

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Seq: DGIS01000010.1 TPA_asm: Sphingobacterium sp. UBA4616 UBA4616_contig_193, whole genome shotgun sequence (234138 bp)
Overview 1 RT 1: 77335-83454 bp Neighborhood of RT #1 [77335, 83454] NB-ARC TPR TPR_2 RVT-Retrons Feature: gene Location: 77335-80199 bp Feature: domain Description: NB-ARC Location: 78379-78637 bp Feature: domain Description: NB-ARC Location: 78379-78637 bp Feature: domain Description: TPR Location: 79492-79774 bp Feature: domain Description: TPR Location: 79492-79774 bp Feature: domain Description: TPR_2 Location: 79963-80041 bp Feature: domain Description: TPR_2 Location: 79963-80041 bp Feature: gene Location: 80277-80420 bp Feature: gene Location: 80553-81653 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 80784-81399 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 80784-81 399 bp Feature: gene Location: 81817-83094 bp Feature: gene Location: 83302-83454 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NB-ARC (pfam00931), TPR (smart00028), TPR_2 (pfam07719), RVT-Retrons

Seq: DGIS01000005.1 TPA_asm: Sphingobacterium sp. UBA4616 UBA4616_contig_45, whole genome shotgun sequence (192509 bp)
Overview 1 RT 1: 34013-39581 bp Neighborhood of RT #1 [34013, 39889] HTH_32 rve RVT-UG28b VirE_N DUF2075 Feature: gene Location: 34013-34360 bp Feature: gene Location: 34351-35235 bp Feature: domain Description: HTH_32 Location: 34498-34717 bp Feature: domain Description: HTH_32 Location: 34498-34717 bp Feature: domain Description: rve Location: 34795-35116 bp Feature: domain Description: rve Location: 34795-35116 bp Feature: gene Location: 35327-37087 bp Feature: RT Description: RVT-UG28b Note: UG28b RT Location: 35765-36476 bp Feature: RT Description: RVT-UG2 8b Note: UG2 8b RT Location: 35765-36476 bp Feature: gene Location: 37302-38249 bp Feature: domain Description: VirE_N Location: 37470-37821 bp Feature: domain Description: VirE_N Location: 37470-3782 1 bp Feature: gene Location: 38399-39889 bp Feature: domain Description: DUF2075 Location: 39017-39581 bp Feature: domain Description: DUF2 075 Location: 39017-39581 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_32 (pfam13565), rve (pfam00665), RVT-UG28b, VirE_N (pfam08800), DUF2075 (pfam09848)