myRT

myRT report for GCA_002388375.1_ASM238837v1

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Seq: DGML01000056.1 TPA_asm: Idiomarina sp. UBA4519 UBA4519_contig_4925, whole genome shotgun sequence (55895 bp)
Overview 1 RT 1: 82-5059 bp Neighborhood of RT #1 [82, 5061] RVT-GII GIIM PRK12566 Feature: gene Location: 82-1353 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 295-916 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 295-91 6 bp Feature: domain Description: GIIM Note: maturase Location: 964-1183 bp Feature: domain Description: GIIM Note: maturase Location: 964-1 1 83 bp Feature: gene Location: 1629-2123 bp Feature: gene Location: 2173-5061 bp Feature: domain Description: PRK12566 Location: 2188-5059 bp Feature: domain Description: PRK1 2566 Location: 21 88-5059 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK12566 (glycine dehydrogenase; Provisional), RVT-GII, GIIM (pfam08388)

Seq: DGML01000058.1 TPA_asm: Idiomarina sp. UBA4519 UBA4519_contig_5336, whole genome shotgun sequence (30315 bp)
Overview 1 RT 1: 22932-29130 bp Neighborhood of RT #1 [22932, 29351] DEXQc_UvrD DEXQc_UvrD UvrD RVT-Retrons Lipase_3 Feature: gene Location: 22932-24692 bp Feature: domain Description: DEXQc_UvrD Location: 22950-23217 bp Feature: domain Description: DEXQc_UvrD Location: 2 2 950-2 32 17 bp Feature: domain Description: DEXQc_UvrD Location: 23436-23799 bp Feature: domain Description: DEXQc_UvrD Location: 2 3436-2 3799 bp Feature: domain Description: UvrD Location: 24456-24636 bp Feature: domain Description: UvrD Location: 2 4456-2 4636 bp Feature: gene Location: 24765-26048 bp Feature: gene Location: 26733-27464 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 26736-27198 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 6736-2 7198 bp Feature: gene Location: 27851-27982 bp Feature: gene Location: 28290-29351 bp Feature: domain Description: Lipase_3 Location: 28671-29130 bp Feature: domain Description: Lipase_3 Location: 2 8671-2 9130 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DEXQc_UvrD (cd17932), UvrD (COG0210), RVT-Retrons, Lipase_3 (pfam01764)