myRT

myRT report for GCA_002388765.1_ASM238876v1

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Seq: DGND01000017.1 TPA_asm: Gammaproteobacteria bacterium UBA4501 UBA4501_contig_277, whole genome shotgun sequence (289006 bp)
Overview 1 RT 1: 47412-54459 bp Neighborhood of RT #1 [47412, 54494] Peptidases_S8_Subtilisin_like_2 SpoVK RVT-Retrons RMtype1_S_EcoKI-TRD2-CR2_like RMtype1_S_EcoKI-TRD2-CR2_like Feature: gene Location: 47412-49916 bp Feature: domain Description: Peptidases_S8_Subtilisin_like_2 Location: 48264-49185 bp Feature: domain Description: Peptidases_S8_Subtilisin_like_2 Location: 48264-491 85 bp Feature: gene Location: 49940-50941 bp Feature: domain Description: SpoVK Location: 50180-50870 bp Feature: domain Description: SpoVK Location: 501 80-50870 bp Feature: gene Location: 51069-52568 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 51765-52317 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 51 765-5231 7 bp Feature: gene Location: 52565-53140 bp Feature: gene Location: 53187-54494 bp Feature: domain Description: RMtype1_S_EcoKI-TRD2-CR2_like Location: 53607-53751 bp Feature: domain Description: RMtype1 _S_EcoKI-TRD2-CR2_like Location: 53607-53751 bp Feature: domain Description: RMtype1_S_EcoKI-TRD2-CR2_like Location: 53892-54459 bp Feature: domain Description: RMtype1 _S_EcoKI-TRD2-CR2_like Location: 53892-54459 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Peptidases_S8_Subtilisin_like_2 (cd04847), SpoVK (COG0464), RVT-Retrons, RMtype1_S_EcoKI-TRD2-CR2_like (cd17261)

Seq: DGND01000011.1 TPA_asm: Gammaproteobacteria bacterium UBA4501 UBA4501_contig_569, whole genome shotgun sequence (423244 bp)
Overview 1 RT 1: 315407-321147 bp Neighborhood of RT #1 [315407, 321188] ligand_gated_channel RVT-GII GIIM LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 Feature: gene Location: 315407-317656 bp Feature: domain Description: ligand_gated_channel Location: 315539-317654 bp Feature: domain Description: ligand_gated_channel Location: 315539-317654 bp Feature: gene Location: 317794-317967 bp Feature: gene Location: 317993-319231 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 318197-318854 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 318197-318854 bp Feature: domain Description: GIIM Note: maturase Location: 318932-319154 bp Feature: domain Description: GIIM Note: maturase Location: 318932 -319154 bp Feature: gene Location: 319299-319481 bp Feature: gene Location: 319689-321188 bp Feature: domain Description: LZ_Tnp_IS66 Location: 319914-320133 bp Feature: domain Description: LZ_Tnp_IS66 Location: 319914-32 0133 bp Feature: domain Description: zf-IS66 Location: 320154-320280 bp Feature: domain Description: zf-IS66 Location: 32 0154-32 02 80 bp Feature: domain Description: DDE_Tnp_IS66 Location: 320322-321147 bp Feature: domain Description: DDE_Tnp_IS66 Location: 32 032 2 -32 1147 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ligand_gated_channel (cd01347), RVT-GII, GIIM (pfam08388), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050)