myRT

myRT report for GCA_002388905.1_ASM238890v1

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Seq: DGNJ01000090.1 TPA_asm: Cellvibrionales bacterium UBA4495 UBA4495_contig_1563, whole genome shotgun sequence (20536 bp)
Overview 1 RT 1: 16047-20281 bp Neighborhood of RT #1 [16047, 20463] CirA RVT-GII GIIM Feature: gene Location: 16047-18557 bp Feature: domain Description: CirA Location: 16068-18555 bp Feature: domain Description: CirA Location: 1 6068-1 8555 bp Feature: gene Location: 18599-19183 bp Feature: gene Location: 19195-20463 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19396-20014 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 9396-2001 4 bp Feature: domain Description: GIIM Note: maturase Location: 20065-20281 bp Feature: domain Description: GIIM Note: maturase Location: 20065-20281 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CirA (COG1629), RVT-GII, GIIM (pfam08388)

Seq: DGNJ01000093.1 TPA_asm: Cellvibrionales bacterium UBA4495 UBA4495_contig_308, whole genome shotgun sequence (104301 bp)
Overview 1 RT 1: 56738-62227 bp Neighborhood of RT #1 [56738, 62227] RecJ DHHA1 CaiD RVT-GII GIIM Feature: gene Location: 56738-57703 bp Feature: domain Description: RecJ Note: exonuclease Location: 56861-57293 bp Feature: domain Description: RecJ Note: exonuclease Location: 56861-572 93 bp Feature: domain Description: DHHA1 Location: 57404-57683 bp Feature: domain Description: DHHA1 Location: 57404-57683 bp Feature: gene Location: 57726-58487 bp Feature: domain Description: CaiD Location: 57732-58476 bp Feature: domain Description: CaiD Location: 57732 -58476 bp Feature: gene Location: 58620-59975 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58941-59553 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58941-59553 bp Feature: domain Description: GIIM Note: maturase Location: 59613-59823 bp Feature: domain Description: GIIM Note: maturase Location: 59613-5982 3 bp Feature: gene Location: 60824-61288 bp Feature: gene Location: 61562-62227 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RecJ (COG4199), DHHA1 (pfam02272), CaiD (COG1024), RVT-GII, GIIM (pfam08388)