myRT

myRT report for GCA_002389165.1_ASM238916v1

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Seq: DGNY01000019.1 TPA_asm: Pseudomonas stutzeri isolate UBA4480 UBA4480_contig_73, whole genome shotgun sequence (136547 bp)
Overview 1 RT 1: 104474-110185 bp Neighborhood of RT #1 [104474, 110193] DUF4870 rph RVT_N RVT-GII YkfC HNHc YicC gmk Feature: gene Location: 104474-104842 bp Feature: domain Description: DUF4870 Location: 104519-104837 bp Feature: domain Description: DUF4870 Location: 1 0451 9-1 04837 bp Feature: gene Location: 104859-105581 bp Feature: domain Description: rph Location: 104868-105576 bp Feature: domain Description: rph Location: 1 04868-1 05576 bp Feature: gene Location: 105735-107465 bp Feature: RT Description: RVT_N Location: 105795-106038 bp Feature: RT Description: RVT_N Location: 1 05795-1 06038 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 106086-106737 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 06086-1 06737 bp Feature: domain Description: YkfC Location: 106941-107109 bp Feature: domain Description: YkfC Location: 1 06941 -1 071 09 bp Feature: domain Description: HNHc Note: nucleases Location: 107271-107427 bp Feature: domain Description: HNHc Note: nucleases Location: 1 07271 -1 07427 bp Feature: gene Location: 108648-109511 bp Feature: domain Description: YicC Location: 108651-109509 bp Feature: domain Description: YicC Location: 1 08651 -1 09509 bp Feature: gene Location: 109525-110193 bp Feature: domain Description: gmk Location: 109585-110185 bp Feature: domain Description: gmk Location: 1 09585-1 1 01 85 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4870 (pfam09685), rph (PRK00173), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507), YicC (COG1561), gmk (PRK14738)