myRT

myRT report for GCA_002390745.1_ASM239074v1

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Seq: DGQK01000023.1 TPA_asm: Bacteroidetes bacterium UBA4416 UBA4416_contig_1119, whole genome shotgun sequence (162376 bp)
Overview 1 RT 1: 19624-23081 bp Neighborhood of RT #1 [19624, 23149] PRK05409 RVT-Retrons 4HBT AcrR Feature: gene Location: 19624-20460 bp Feature: domain Description: PRK05409 Location: 19657-20452 bp Feature: domain Description: PRK05409 Location: 1 9657-20452 bp Feature: gene Location: 20457-21014 bp Feature: gene Location: 21155-21904 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 21158-21527 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 21 1 58-21 527 bp Feature: gene Location: 22003-22491 bp Feature: domain Description: 4HBT Location: 22036-22363 bp Feature: domain Description: 4HBT Location: 22036-22363 bp Feature: gene Location: 22550-23149 bp Feature: domain Description: AcrR Location: 22571-23081 bp Feature: domain Description: AcrR Location: 22571 -23081 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05409 (hypothetical protein; Provisional), RVT-Retrons, 4HBT (pfam03061), AcrR (COG1309)

Seq: DGQK01000006.1 TPA_asm: Bacteroidetes bacterium UBA4416 UBA4416_contig_5155, whole genome shotgun sequence (31845 bp)
Overview 1 RT 1: 26653-30766 bp Neighborhood of RT #1 [26653, 30766] Polbeta HEPN RVT-UG12 Feature: gene Location: 26653-27519 bp Feature: domain Description: Polbeta Location: 26737-27046 bp Feature: domain Description: Polbeta Location: 2 6737-2 7046 bp Feature: domain Description: HEPN Location: 27133-27487 bp Feature: domain Description: HEPN Location: 2 7133-2 7487 bp Feature: gene Location: 27562-28149 bp Feature: gene Location: 28182-29822 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 28554-28953 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 2 8554-2 8953 bp Feature: gene Location: 29969-30424 bp Feature: gene Location: 30440-30766 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Polbeta (pfam18765), HEPN (smart00748), RVT-UG12