myRT

myRT report for GCA_002391715.1_ASM239171v1

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Seq: DGFO01000200.1 TPA_asm: Clostridium sporogenes isolate UBA3898 UBA3898_contig_1914, whole genome shotgun sequence (23559 bp)
Overview 1 RT 1: 14038-18503 bp Neighborhood of RT #1 [14038, 18511] OmpR BaeS RVT-GII RVT-GII GIIM LolD Feature: gene Location: 14038-14724 bp Feature: domain Description: OmpR Location: 14047-14704 bp Feature: domain Description: OmpR Location: 1 4047-1 4704 bp Feature: gene Location: 14814-15752 bp Feature: domain Description: BaeS Location: 14958-15741 bp Feature: domain Description: BaeS Location: 1 4958-1 5741 bp Feature: gene Location: 16235-16750 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16580-16745 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 6580-1 6745 bp Feature: gene Location: 16787-17197 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16790-17195 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 6790-1 71 95 bp Feature: gene Location: 17333-17644 bp Feature: domain Description: GIIM Note: maturase Location: 17342-17480 bp Feature: domain Description: GIIM Note: maturase Location: 1 7342-1 7480 bp Feature: gene Location: 17846-18511 bp Feature: domain Description: LolD Location: 17858-18503 bp Feature: domain Description: LolD Location: 1 7858-1 8503 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT OmpR (COG0745), BaeS (COG0642), RVT-GII, GIIM (pfam08388), LolD (COG1136)