myRT

myRT report for GCA_002392885.1_ASM239288v1

Download annotations/find similar RTs

Seq: DGHN01000233.1 TPA_asm: Lachnospiraceae bacterium UBA3847 UBA3847_contig_207094, whole genome shotgun sequence (3627 bp)
Overview 1 RT 1: 115-3241 bp Neighborhood of RT #1 [115, 3624] rSAM_fuse_unch RVT-UG26 Feature: gene Location: 115-3624 bp Feature: domain Description: rSAM_fuse_unch Location: 145-1708 bp Feature: domain Description: rSAM_fuse_unch Location: 1 45-1 708 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 2629-3241 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 2629-3241 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rSAM_fuse_unch (TIGR03960), RVT-UG26

Seq: DGHN01000097.1 TPA_asm: Lachnospiraceae bacterium UBA3847 UBA3847_contig_76123, whole genome shotgun sequence (8113 bp)
Overview 1 RT 1: 2184-7942 bp Neighborhood of RT #1 [2184, 7942] COG1479 DUF4268 Macro_Appr_pase_like RVT-GII GIIM Feature: gene Location: 2184-2393 bp Feature: gene Location: 2414-5539 bp Feature: domain Description: COG1479 Location: 2420-3737 bp Feature: domain Description: COG1479 Location: 2 42 0-3737 bp Feature: domain Description: DUF4268 Location: 4532-4934 bp Feature: domain Description: DUF42 68 Location: 4532 -4934 bp Feature: domain Description: Macro_Appr_pase_like Location: 5018-5483 bp Feature: domain Description: Macro_Appr_pase_like Location: 5018-5483 bp Feature: gene Location: 5791-7089 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6046-6736 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6046-6736 bp Feature: domain Description: GIIM Note: maturase Location: 6796-7021 bp Feature: domain Description: GIIM Note: maturase Location: 6796-702 1 bp Feature: gene Location: 7189-7329 bp Feature: gene Location: 7487-7942 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG1479 (Uncharacterized conserved protein, contains ParB-like and HNH nuclease domains ), DUF4268 (pfam14088), Macro_Appr_pase_like, RVT-GII, GIIM (pfam08388)