myRT

myRT report for GCA_002393195.1_ASM239319v1

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Seq: DGIK01000015.1 TPA_asm: Bacteroidales bacterium UBA3824 UBA3824_contig_235101, whole genome shotgun sequence (12198 bp)
Overview 1 RT 1: 4486-10335 bp Neighborhood of RT #1 [4486, 10472] DUF1566 RVT-DGRs HRDC LRR_3 LRR_3 LRR_3 LRR_3 YfmG Feature: gene Location: 4486-4722 bp Feature: gene Location: 4811-5722 bp Feature: domain Description: DUF1566 Location: 5231-5714 bp Feature: domain Description: DUF1 566 Location: 5231 -571 4 bp Feature: gene Location: 6066-7010 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 6237-6819 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 6237-681 9 bp Feature: gene Location: 7046-7501 bp Feature: domain Description: HRDC Location: 7286-7478 bp Feature: domain Description: HRDC Location: 7286-7478 bp Feature: gene Location: 7596-10472 bp Feature: domain Description: LRR_3 Location: 7953-8061 bp Feature: domain Description: LRR_3 Location: 7953-8061 bp Feature: domain Description: LRR_3 Location: 8220-8472 bp Feature: domain Description: LRR_3 Location: 8220-8472 bp Feature: domain Description: LRR_3 Location: 8814-8985 bp Feature: domain Description: LRR_3 Location: 881 4-8985 bp Feature: domain Description: LRR_3 Location: 9339-9549 bp Feature: domain Description: LRR_3 Location: 9339-9549 bp Feature: domain Description: YfmG Location: 9768-10335 bp Feature: domain Description: YfmG Location: 9768-1 0335 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1566 (pfam07603), RVT-DGRs, HRDC (smart00341), LRR_3 (sd00036), YfmG (COG1262)

Seq: DGIK01000153.1 TPA_asm: Bacteroidales bacterium UBA3824 UBA3824_contig_24090, whole genome shotgun sequence (25797 bp)
Overview 1 RT 1: 12191-18248 bp Neighborhood of RT #1 [12191, 18256] RVT-AbiP2 Bro-N FIDO Feature: gene Location: 12191-13816 bp Feature: gene Location: 13828-15288 bp Feature: gene Location: 15477-17132 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 15936-16407 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 15936-16407 bp Feature: gene Location: 17189-17368 bp Feature: gene Location: 17375-18256 bp Feature: domain Description: Bro-N Location: 17420-17711 bp Feature: domain Description: Bro-N Location: 1742 0-17711 bp Feature: domain Description: FIDO Location: 17762-18248 bp Feature: domain Description: FIDO Location: 17762 -182 48 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2, Bro-N (smart01040), FIDO (COG2184)

Seq: DGIK01000073.1 TPA_asm: Bacteroidales bacterium UBA3824 UBA3824_contig_2841, whole genome shotgun sequence (78463 bp)
Overview 1 RT 1: 19865-25263 bp Neighborhood of RT #1 [19865, 25313] YhcG_C WG_beta_rep WG_beta_rep WG_beta_rep WG_beta_rep WG_beta_rep WG_beta_rep WG_beta_rep WG_beta_rep WG_beta_rep WG_beta_rep RVT-AbiP2 PRK05253 ApbE Feature: gene Location: 19865-20020 bp Feature: domain Description: YhcG_C Location: 19871-19934 bp Feature: domain Description: YhcG_C Location: 19871-1993 4 bp Feature: gene Location: 20066-21241 bp Feature: domain Description: WG_beta_rep Location: 20183-20285 bp Feature: domain Description: WG_beta_rep Location: 20183 -20285 bp Feature: domain Description: WG_beta_rep Location: 20285-20390 bp Feature: domain Description: WG_beta_rep Location: 20285-203 90 bp Feature: domain Description: WG_beta_rep Location: 20390-20495 bp Feature: domain Description: WG_beta_rep Location: 203 90-20495 bp Feature: domain Description: WG_beta_rep Location: 20495-20600 bp Feature: domain Description: WG_beta_rep Location: 20495-20600 bp Feature: domain Description: WG_beta_rep Location: 20600-20705 bp Feature: domain Description: WG_beta_rep Location: 20600-20705 bp Feature: domain Description: WG_beta_rep Location: 20705-20810 bp Feature: domain Description: WG_beta_rep Location: 20705-20810 bp Feature: domain Description: WG_beta_rep Location: 20810-20915 bp Feature: domain Description: WG_beta_rep Location: 20810-20915 bp Feature: domain Description: WG_beta_rep Location: 20915-21020 bp Feature: domain Description: WG_beta_rep Location: 20915-21020 bp Feature: domain Description: WG_beta_rep Location: 21020-21074 bp Feature: domain Description: WG_beta_rep Location: 21020-21074 bp Feature: domain Description: WG_beta_rep Location: 21143-21197 bp Feature: domain Description: WG_beta_rep Location: 21143 -21197 bp Feature: gene Location: 21309-22799 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 21729-22182 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 21729-22182 bp Feature: gene Location: 23242-24132 bp Feature: domain Description: PRK05253 Location: 23245-24130 bp Feature: domain Description: PRK05253 Location: 23 245-2413 0 bp Feature: gene Location: 24204-25313 bp Feature: domain Description: ApbE Location: 24315-25263 bp Feature: domain Description: ApbE Location: 243 15-25263 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YhcG_C, WG_beta_rep (pfam14903), RVT-AbiP2, PRK05253 (sulfate adenylyltransferase subunit CysD), ApbE (pfam02424)

Seq: DGIK01000107.1 TPA_asm: Bacteroidales bacterium UBA3824 UBA3824_contig_58436, whole genome shotgun sequence (25343 bp)
Overview 1 RT 1: 2-4830 bp Neighborhood of RT #1 [2, 4928] COG2865 RVT-Retrons WG_beta_rep WG_beta_rep WG_beta_rep Feature: gene Location: 2-1366 bp Feature: domain Description: COG2865 Location: 14-1226 bp Feature: domain Description: COG2865 Location: 14 -1226 bp Feature: gene Location: 1411-2319 bp Feature: gene Location: 2324-3748 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2504-3116 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2504 -3116 bp Feature: gene Location: 3965-4138 bp Feature: gene Location: 4149-4928 bp Feature: domain Description: WG_beta_rep Location: 4368-4419 bp Feature: domain Description: WG_beta_rep Location: 4 368-4 4 19 bp Feature: domain Description: WG_beta_rep Location: 4638-4731 bp Feature: domain Description: WG_beta_rep Location: 4 638-4 731 bp Feature: domain Description: WG_beta_rep Location: 4731-4830 bp Feature: domain Description: WG_beta_rep Location: 4 731-4 830 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG2865 (Predicted transcriptional regulator, contains HTH domain ), RVT-Retrons, WG_beta_rep (pfam14903)