myRT

myRT report for GCA_002393955.1_ASM239395v1

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Seq: DGSK01000046.1 TPA_asm: Lachnospiraceae bacterium UBA4364 UBA4364_contig_1479, whole genome shotgun sequence (41442 bp)
Overview 1 RT 1: 4919-11725 bp Neighborhood of RT #1 [4919, 11760] NrdD RVT-CRISPR COG4951 Cas2_I_II_III Cas1_I-II-III Feature: gene Location: 4919-5059 bp Feature: gene Location: 5248-7413 bp Feature: domain Description: NrdD Location: 5617-7405 bp Feature: domain Description: NrdD Location: 561 7-7405 bp Feature: gene Location: 7644-10457 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 7854-8460 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 7854-8460 bp Feature: domain Description: COG4951 Location: 9186-9666 bp Feature: domain Description: COG4951 Location: 91 86-9666 bp Feature: gene Location: 10488-10772 bp Feature: domain Description: Cas2_I_II_III Location: 10494-10728 bp Feature: domain Description: Cas2_I_II_III Location: 1 0494-1 0728 bp Feature: gene Location: 10774-11760 bp Feature: domain Description: Cas1_I-II-III Location: 10786-11725 bp Feature: domain Description: Cas1 _I-II-III Location: 1 0786-1 1 725 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NrdD (TIGR02487), RVT-CRISPR, COG4951 (Uncharacterized protein ), Cas2_I_II_III (cl11442), Cas1_I-II-III (cl00656)

Seq: DGSK01000001.1 TPA_asm: Lachnospiraceae bacterium UBA4364 UBA4364_contig_222, whole genome shotgun sequence (534701 bp)
Overview 1 RT 1: 377460-381188 bp Neighborhood of RT #1 [377460, 381188] Phage_holin_4_1 RVT-DGRs Feature: gene Location: 377460-377957 bp Feature: domain Description: Phage_holin_4_1 Location: 377511-377880 bp Feature: domain Description: Phage_holin_4_1 Location: 377511-377880 bp Feature: gene Location: 377954-378130 bp Feature: gene Location: 378332-379405 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 378545-379145 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 378545-379145 bp Feature: gene Location: 379821-380222 bp Feature: gene Location: 380265-381188 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_holin_4_1 (pfam05105), RVT-DGRs