myRT

myRT report for GCA_002394245.1_ASM239424v1

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Seq: DGTG01000166.1 TPA_asm: Lachnospira sp. UBA4342 UBA4342_contig_56623, whole genome shotgun sequence (9939 bp)
Overview 1 RT 1: 2-5974 bp Neighborhood of RT #1 [2, 6018] RVT-GII Peptidases_S8_C5a_Peptidase Peptidases_S8_C5a_Peptidase fn3_5 panB Feature: gene Location: 2-175 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-98 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-98 bp Feature: gene Location: 325-4662 bp Feature: domain Description: Peptidases_S8_C5a_Peptidase Location: 763-1432 bp Feature: domain Description: Peptidases_S8_C5a_Peptidase Location: 763-1 432 bp Feature: domain Description: Peptidases_S8_C5a_Peptidase Location: 1453-1798 bp Feature: domain Description: Peptidases_S8_C5a_Peptidase Location: 1 453-1 798 bp Feature: domain Description: fn3_5 Location: 1840-2164 bp Feature: domain Description: fn3_5 Location: 1 840-21 64 bp Feature: gene Location: 5140-6018 bp Feature: domain Description: panB Location: 5188-5974 bp Feature: domain Description: panB Location: 51 88-5974 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Peptidases_S8_C5a_Peptidase (cd07475), fn3_5 (pfam06280), panB (TIGR00222)

Seq: DGTG01000124.1 TPA_asm: Lachnospira sp. UBA4342 UBA4342_contig_90349, whole genome shotgun sequence (15185 bp)
Overview 1 RT 1: 637-6434 bp Neighborhood of RT #1 [637, 7945] lysS tRNA_bind_EcMetRS_like RVT-UG26 Big_2 Big_2 Feature: gene Location: 637-2625 bp Feature: domain Description: lysS Location: 670-2167 bp Feature: domain Description: lysS Location: 670-2 167 bp Feature: domain Description: tRNA_bind_EcMetRS_like Location: 2290-2620 bp Feature: domain Description: tRNA_bind_EcMetRS_like Location: 2 2 90-2 62 0 bp Feature: gene Location: 2750-3433 bp Feature: gene Location: 3634-4848 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 3832-4447 bp Feature: RT Description: RVT-UG2 6 Note: UG2 6 RT Location: 3832 -4447 bp Feature: gene Location: 5134-5370 bp Feature: gene Location: 5858-7945 bp Feature: domain Description: Big_2 Location: 5981-6179 bp Feature: domain Description: Big_2 Location: 5981-6179 bp Feature: domain Description: Big_2 Location: 6209-6434 bp Feature: domain Description: Big_2 Location: 62 09-6434 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT lysS (PRK02983), tRNA_bind_EcMetRS_like (cd02800), RVT-UG26, Big_2 (pfam02368)