myRT

myRT report for GCA_002395155.1_ASM239515v1

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Seq: DGWD01000043.1 TPA_asm: Treponema sp. UBA4267 UBA4267_contig_17639, whole genome shotgun sequence (56332 bp)
Overview 1 RT 1: 18147-27113 bp Neighborhood of RT #1 [18147, 27118] VbhA_like FIDO COG2865 DUF262 COG3472 RVT-UG8 RVT-UG3 RMtype1_S_EcoKI-TRD2-CR2_like RMtype1_S_EcoKI-TRD2-CR2_like COG2865 Feature: gene Location: 18147-19244 bp Feature: domain Description: VbhA_like Location: 18234-18369 bp Feature: domain Description: VbhA_like Location: 1 8234-1 8369 bp Feature: domain Description: FIDO Location: 18390-18960 bp Feature: domain Description: FIDO Location: 1 8390-1 8960 bp Feature: domain Description: COG2865 Location: 19020-19239 bp Feature: domain Description: COG2865 Location: 1 9020-1 9239 bp Feature: gene Location: 19256-21145 bp Feature: domain Description: DUF262 Location: 19382-20003 bp Feature: domain Description: DUF262 Location: 1 9382-20003 bp Feature: domain Description: COG3472 Location: 20378-21131 bp Feature: domain Description: COG3472 Location: 20378-21 1 31 bp Feature: gene Location: 21256-23151 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 21739-22189 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 21 739-221 89 bp Feature: gene Location: 23144-24364 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 23429-23888 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 23429-23888 bp Feature: gene Location: 24368-25654 bp Feature: domain Description: RMtype1_S_EcoKI-TRD2-CR2_like Location: 24737-24989 bp Feature: domain Description: RMtype1 _S_EcoKI-TRD2-CR2_like Location: 24737-24989 bp Feature: domain Description: RMtype1_S_EcoKI-TRD2-CR2_like Location: 25055-25622 bp Feature: domain Description: RMtype1 _S_EcoKI-TRD2-CR2_like Location: 25055-25622 bp Feature: gene Location: 25667-27118 bp Feature: domain Description: COG2865 Location: 25670-27113 bp Feature: domain Description: COG2865 Location: 25670-271 1 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VbhA_like (cl17006), FIDO (COG2184), COG2865 (Predicted transcriptional regulator, contains HTH domain ), DUF262 (pfam03235), COG3472 (Uncharacterized protein ), RVT-UG8, RVT-UG3, RMtype1_S_EcoKI-TRD2-CR2_like (cd17261)