myRT

myRT report for GCA_002395475.1_ASM239547v1

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Seq: DGXC01000153.1 TPA_asm: Dorea longicatena isolate UBA4242 UBA4242_contig_103587, whole genome shotgun sequence (12923 bp)
Overview 1 RT 1: 1603-5548 bp Neighborhood of RT #1 [1603, 5548] BsuBI_PstI_RE_N BsuBI_PstI_RE met_A_Alw26 met_A_Alw26 RVT-Retrons HTH_XRE Feature: gene Location: 1603-2520 bp Feature: domain Description: BsuBI_PstI_RE_N Location: 1606-2005 bp Feature: domain Description: BsuBI_PstI_RE_N Location: 1 606-2005 bp Feature: domain Description: BsuBI_PstI_RE Location: 2044-2497 bp Feature: domain Description: BsuBI_PstI_RE Location: 2044-2497 bp Feature: gene Location: 2513-3997 bp Feature: domain Description: met_A_Alw26 Location: 2579-2990 bp Feature: domain Description: met_A_Alw26 Location: 2579-2990 bp Feature: domain Description: met_A_Alw26 Location: 3029-3923 bp Feature: domain Description: met_A_Alw26 Location: 3029-3923 bp Feature: gene Location: 4023-5009 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4164-4704 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 41 64-4704 bp Feature: gene Location: 5002-5316 bp Feature: domain Description: HTH_XRE Location: 5023-5179 bp Feature: domain Description: HTH_XRE Location: 5023-51 79 bp Feature: gene Location: 5348-5548 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT BsuBI_PstI_RE_N (pfam17728), BsuBI_PstI_RE (pfam06616), met_A_Alw26 (TIGR02987), RVT-Retrons, HTH_XRE (smart00530)

Seq: DGXC01000100.1 TPA_asm: Dorea longicatena isolate UBA4242 UBA4242_contig_117463, whole genome shotgun sequence (9083 bp)
Overview 1 RT 1: 1874-7995 bp Neighborhood of RT #1 [1874, 8102] RVT-UG15 AbiTii COG1373 Feature: gene Location: 1874-2356 bp Feature: gene Location: 2337-3488 bp Feature: gene Location: 3778-5373 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 4237-4678 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 42 37-4678 bp Feature: gene Location: 5487-6533 bp Feature: domain Description: AbiTii Location: 5538-6066 bp Feature: domain Description: AbiTii Location: 5538-6066 bp Feature: gene Location: 6765-8102 bp Feature: domain Description: COG1373 Location: 6774-7995 bp Feature: domain Description: COG1373 Location: 6774-7995 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG15, AbiTii (pfam18864), COG1373 (Predicted ATPase, AAA+ superfamily )