myRT

myRT report for GCA_002395545.1_ASM239554v1

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Seq: DGXH01000070.1 TPA_asm: Lachnospiraceae bacterium UBA4237 UBA4237_contig_37156, whole genome shotgun sequence (8789 bp)
Overview 1 RT 1: 4722-8612 bp Neighborhood of RT #1 [4722, 8788] PTS-II-ABC-beta Hydrolase_3 RVT-GII GIIM Feature: gene Location: 4722-6710 bp Feature: domain Description: PTS-II-ABC-beta Location: 4737-6702 bp Feature: domain Description: PTS-II-ABC-beta Location: 4737-6702 bp Feature: gene Location: 6918-7748 bp Feature: domain Description: Hydrolase_3 Location: 6936-7725 bp Feature: domain Description: Hydrolase_3 Location: 6936-7725 bp Feature: gene Location: 7841-8788 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7844-8333 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7844-8333 bp Feature: domain Description: GIIM Note: maturase Location: 8393-8612 bp Feature: domain Description: GIIM Note: maturase Location: 8393-861 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PTS-II-ABC-beta (TIGR01995), Hydrolase_3 (pfam08282), RVT-GII, GIIM (pfam08388)

Seq: DGXH01000067.1 TPA_asm: Lachnospiraceae bacterium UBA4237 UBA4237_contig_4059, whole genome shotgun sequence (69387 bp)
Overview 1 RT 1: 50352-54533 bp Neighborhood of RT #1 [50352, 54535] RacX LPLAT_AGPAT-like RPC10 RVT-UG26 antidote_HigA HigB Feature: gene Location: 50352-51056 bp Feature: domain Description: RacX Location: 50367-51039 bp Feature: domain Description: RacX Location: 50367-51039 bp Feature: gene Location: 51162-52442 bp Feature: domain Description: LPLAT_AGPAT-like Location: 51285-51804 bp Feature: domain Description: LPLAT_AGPAT-like Location: 512 85-51804 bp Feature: domain Description: RPC10 Location: 51900-51975 bp Feature: domain Description: RPC10 Location: 51900-51975 bp Feature: gene Location: 52464-53735 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 52713-53322 bp Feature: RT Description: RVT-UG2 6 Note: UG2 6 RT Location: 52 713-5332 2 bp Feature: gene Location: 53931-54227 bp Feature: domain Description: antidote_HigA Location: 53952-54174 bp Feature: domain Description: antidote_HigA Location: 53952 -54174 bp Feature: gene Location: 54251-54535 bp Feature: domain Description: HigB Location: 54254-54533 bp Feature: domain Description: HigB Location: 542 54-54533 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RacX (COG1794), LPLAT_AGPAT-like (cd07989), RPC10 (COG1996), RVT-UG26, antidote_HigA (TIGR02607), HigB (COG4680)