myRT

myRT report for GCA_002396465.1_ASM239646v1

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Seq: DGXW01000176.1 TPA_asm: Dechloromonas sp. UBA5022 UBA5022_contig_1493, whole genome shotgun sequence (13773 bp)
Overview 1 RT 1: 213-2946 bp Neighborhood of RT #1 [213, 2946] RVT-GII GIIM Feature: gene Location: 213-1037 bp Feature: gene Location: 1137-2387 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1329-1947 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 329-1 947 bp Feature: domain Description: GIIM Note: maturase Location: 1989-2193 bp Feature: domain Description: GIIM Note: maturase Location: 1 989-21 93 bp Feature: gene Location: 2296-2574 bp Feature: gene Location: 2656-2946 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: DGXW01000092.1 TPA_asm: Dechloromonas sp. UBA5022 UBA5022_contig_502, whole genome shotgun sequence (21529 bp)
Overview 1 RT 1: 1-4544 bp Neighborhood of RT #1 [1, 4544] RVT-UG3 RVT-UG8 LivF Feature: gene Location: 1-1086 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 106-601 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 106-601 bp Feature: gene Location: 1096-3054 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1621-2062 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 162 1-2 062 bp Feature: gene Location: 3509-3709 bp Feature: domain Description: LivF Location: 3512-3704 bp Feature: domain Description: LivF Location: 3512 -3704 bp Feature: gene Location: 3780-4544 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG3, RVT-UG8, LivF (COG0410)

Seq: DGXW01000055.1 TPA_asm: Dechloromonas sp. UBA5022 UBA5022_contig_6570, whole genome shotgun sequence (9711 bp)
Overview 1 RT 1: 650-5344 bp Neighborhood of RT #1 [650, 5361] RVT-GII GIIM Nterm_to_SelD SelD TIGR04348 Feature: gene Location: 650-1882 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 848-1511 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 848-1511 bp Feature: domain Description: GIIM Note: maturase Location: 1580-1787 bp Feature: domain Description: GIIM Note: maturase Location: 1580-1787 bp Feature: gene Location: 2107-4386 bp Feature: domain Description: Nterm_to_SelD Location: 2140-3253 bp Feature: domain Description: Nterm_to_SelD Location: 2140-3 253 bp Feature: domain Description: SelD Location: 3352-4342 bp Feature: domain Description: SelD Location: 3 3 52-43 42 bp Feature: gene Location: 4390-5361 bp Feature: domain Description: TIGR04348 Location: 4402-5344 bp Feature: domain Description: TIGR043 48 Location: 4402-53 44 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Nterm_to_SelD (TIGR03169), SelD (COG0709), TIGR04348 (putative glycosyltransferase, TIGR04348 family)