myRT

myRT report for GCA_002396725.1_ASM239672v1

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Seq: DGXX01000070.1 TPA_asm: Dechloromonas sp. UBA5021 UBA5021_contig_5589, whole genome shotgun sequence (21540 bp)
Overview 1 RT 1: 70-4265 bp Neighborhood of RT #1 [70, 4265] RVT-UG3 RVT-UG8 LivF Feature: gene Location: 70-807 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 73-322 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 73-322 bp Feature: gene Location: 817-2775 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1342-1783 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1 342-1 783 bp Feature: gene Location: 3230-3430 bp Feature: domain Description: LivF Location: 3233-3425 bp Feature: domain Description: LivF Location: 3233-3425 bp Feature: gene Location: 3501-4265 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG3, RVT-UG8, LivF (COG0410)

Seq: DGXX01000010.1 TPA_asm: Dechloromonas sp. UBA5021 UBA5021_contig_7630, whole genome shotgun sequence (10359 bp)
Overview 1 RT 1: 431-5125 bp Neighborhood of RT #1 [431, 5142] RVT-GII GIIM Nterm_to_SelD SelD TIGR04348 Feature: gene Location: 431-1663 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 629-1292 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62 9-12 92 bp Feature: domain Description: GIIM Note: maturase Location: 1361-1568 bp Feature: domain Description: GIIM Note: maturase Location: 1361-1568 bp Feature: gene Location: 1888-4167 bp Feature: domain Description: Nterm_to_SelD Location: 1921-3034 bp Feature: domain Description: Nterm_to_SelD Location: 192 1-3034 bp Feature: domain Description: SelD Location: 3133-4123 bp Feature: domain Description: SelD Location: 3133-412 3 bp Feature: gene Location: 4171-5142 bp Feature: domain Description: TIGR04348 Location: 4183-5125 bp Feature: domain Description: TIGR04348 Location: 4183-512 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Nterm_to_SelD (TIGR03169), SelD (COG0709), TIGR04348 (putative glycosyltransferase, TIGR04348 family)