myRT

myRT report for GCA_002398825.1_ASM239882v1

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Seq: DHBS01000007.1 TPA_asm: Syntrophomonas sp. UBA4922 UBA4922_contig_4449, whole genome shotgun sequence (114421 bp)
Overview 1 RT 1: 1079-3651 bp Neighborhood of RT #1 [1079, 3651] RVT-GII GIIM DrsE_2 Feature: gene Location: 1079-2488 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1433-2051 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 433-2051 bp Feature: domain Description: GIIM Note: maturase Location: 2102-2333 bp Feature: domain Description: GIIM Note: maturase Location: 21 02-2333 bp Feature: gene Location: 2593-3072 bp Feature: domain Description: DrsE_2 Location: 2611-3067 bp Feature: domain Description: DrsE_2 Location: 261 1 -3067 bp Feature: gene Location: 3508-3651 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DrsE_2 (pfam13686)

Seq: DHBS01000013.1 TPA_asm: Syntrophomonas sp. UBA4922 UBA4922_contig_8209, whole genome shotgun sequence (91118 bp)
Overview 1 RT 1: 30542-36539 bp Neighborhood of RT #1 [30542, 36539] KU_like F420_ligase RVT-GII Feature: gene Location: 30542-31435 bp Feature: domain Description: KU_like Location: 30590-31340 bp Feature: domain Description: KU_like Location: 30590-31340 bp Feature: gene Location: 31562-32752 bp Feature: domain Description: F420_ligase Location: 31613-32738 bp Feature: domain Description: F42 0_ligase Location: 31613-32 738 bp Feature: gene Location: 33533-34111 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33788-34094 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33788-34094 bp Feature: gene Location: 35117-35968 bp Feature: gene Location: 36063-36539 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KU_like (cd00789), F420_ligase (pfam01996), RVT-GII

Seq: DHBS01000041.1 TPA_asm: Syntrophomonas sp. UBA4922 UBA4922_contig_8501, whole genome shotgun sequence (108435 bp)
Overview 1 RT 1: 73467-76927 bp Neighborhood of RT #1 [73467, 76935] RVT-UG7 Hrd P-II Feature: gene Location: 73467-73685 bp Feature: gene Location: 73893-74144 bp Feature: gene Location: 74209-75780 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 74620-75019 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 74620-75019 bp Feature: gene Location: 76002-76535 bp Feature: domain Description: Hrd Location: 76164-76374 bp Feature: domain Description: Hrd Location: 76164-763 74 bp Feature: gene Location: 76624-76935 bp Feature: domain Description: P-II Location: 76651-76927 bp Feature: domain Description: P-II Location: 76651-76927 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG7, Hrd (LOAD_Hrd), P-II (smart00938)