myRT

myRT report for GCA_002399125.1_ASM239912v1

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Seq: DHDC01000083.1 TPA_asm: Lactobacillus acetotolerans isolate UBA4886 UBA4886_contig_3668, whole genome shotgun sequence (22138 bp)
Overview 1 RT 1: 8717-13142 bp Neighborhood of RT #1 [8717, 13142] LiaF Nudix_N Nudix_Hydrolase_14 RVT-GII GIIM RelB Feature: gene Location: 8717-9475 bp Feature: domain Description: LiaF Location: 8759-9404 bp Feature: domain Description: LiaF Location: 8759-9404 bp Feature: gene Location: 9504-9902 bp Feature: domain Description: Nudix_N Location: 9519-9684 bp Feature: domain Description: Nudix_N Location: 951 9-9684 bp Feature: domain Description: Nudix_Hydrolase_14 Location: 9711-9882 bp Feature: domain Description: Nudix_Hydrolase_1 4 Location: 971 1 -9882 bp Feature: gene Location: 11022-12338 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11241-11859 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 241 -1 1 859 bp Feature: domain Description: GIIM Note: maturase Location: 11916-12126 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 91 6-1 21 26 bp Feature: gene Location: 12679-12939 bp Feature: domain Description: RelB Location: 12694-12922 bp Feature: domain Description: RelB Location: 1 2694-1 2922 bp Feature: gene Location: 12963-13142 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), RelB (pfam04221), LiaF (COG4758), Nudix_N (pfam12535), Nudix_Hydrolase_14 (cd04672)